Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Stk26-202ENSMUST00000114887 3173 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Ulk4-209ENSMUST00000171923 4103 ntAPPRIS P2 TSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Olfr1426-207ENSMUST00000220005 2466 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Pbrm1-205ENSMUST00000112092 5009 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm22150-201ENSMUST00000104447 135 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Rpl35a-202ENSMUST00000115075 518 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm12692-201ENSMUST00000121092 546 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Alg13-207ENSMUST00000149330 479 ntTSL 2 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Snhg7-201ENSMUST00000181621 139 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm38247-201ENSMUST00000194675 433 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm43471-201ENSMUST00000197550 467 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm44508-201ENSMUST00000206943 1157 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm33682-201ENSMUST00000222233 256 ntTSL 3 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 AC163038.1-201ENSMUST00000223632 1142 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 AC134913.1-201ENSMUST00000224563 504 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Bdh2-201ENSMUST00000029817 1059 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Olfr1255-201ENSMUST00000057369 933 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm5590-201ENSMUST00000059110 345 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm4953-201ENSMUST00000077309 483 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Mir486-201ENSMUST00000093576 128 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Lrrtm3-201ENSMUST00000105439 3896 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Nf1-201ENSMUST00000071325 11917 ntAPPRIS P2 TSL 2 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm43982-201ENSMUST00000204995 1829 ntBASIC8.19□□□□□ -1.1
Trim43aQ3TL54 9530052C20Rik-201ENSMUST00000181882 1372 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Osbpl6-202ENSMUST00000111929 8257 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 1810011H11Rik-201ENSMUST00000039191 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Gm45194-202ENSMUST00000207962 1991 ntAPPRIS P5 TSL 5 BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Trim43aQ3TL54 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Wdr44-201ENSMUST00000035766 4167 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Tmc3-203ENSMUST00000164944 3306 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Med12l-202ENSMUST00000040325 10159 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gpr182-201ENSMUST00000079692 3954 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Aldh18a1-207ENSMUST00000176939 3427 ntAPPRIS ALT1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm38697-201ENSMUST00000198061 1746 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Klf10-202ENSMUST00000226363 2917 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm42514-201ENSMUST00000196636 1832 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm30382-202ENSMUST00000199007 1801 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm10424-202ENSMUST00000201031 1848 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Tssk1-201ENSMUST00000046937 3700 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Trav12-1-201ENSMUST00000103650 344 ntAPPRIS ALT2 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm14528-201ENSMUST00000120615 231 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm12811-201ENSMUST00000125237 667 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm13872-203ENSMUST00000147082 657 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Scgb1b25-ps-201ENSMUST00000186419 415 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm29362-201ENSMUST00000187898 133 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm8870-201ENSMUST00000188170 775 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm8510-201ENSMUST00000189202 895 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm29175-201ENSMUST00000189500 402 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm28193-201ENSMUST00000189863 615 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 AC137117.3-201ENSMUST00000226265 485 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 5330416C01Rik-203ENSMUST00000144993 3287 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Nr5a2-201ENSMUST00000027649 4733 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Nwd1-209ENSMUST00000228312 10789 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm14373-201ENSMUST00000122467 2158 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm28649-201ENSMUST00000189153 1581 ntBASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC8.18□□□□□ -1.1
Trim43aQ3TL54 Gm3591-201ENSMUST00000164408 1745 ntAPPRIS P5 TSL 5 BASIC8.17□□□□□ -1.1
Trim43aQ3TL54 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
Trim43aQ3TL54 Olfr305-203ENSMUST00000213869 3530 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
Trim43aQ3TL54 Ccdc162-210ENSMUST00000189488 7260 ntAPPRIS P5 TSL 5 BASIC8.17□□□□□ -1.1
Trim43aQ3TL54 Vmn1r26-204ENSMUST00000228951 4591 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
Trim43aQ3TL54 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 101.2 ms