Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC11.74□□□□□ -0.53
Cux1P53564 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Gm11585-201ENSMUST00000120901 569 ntBASIC11.74□□□□□ -0.53
Cux1P53564 Gm12477-201ENSMUST00000121221 571 ntBASIC11.74□□□□□ -0.53
Cux1P53564 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC11.74□□□□□ -0.53
Cux1P53564 Gm12863-201ENSMUST00000155069 536 ntTSL 2 BASIC11.74□□□□□ -0.53
Cux1P53564 Gm29611-201ENSMUST00000186132 1011 ntTSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Olfr572-202ENSMUST00000214096 1126 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Gm21762-202ENSMUST00000225881 830 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cux1P53564 Serpina1e-201ENSMUST00000085054 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cux1P53564 Olfr458-201ENSMUST00000090156 942 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Cux1P53564 Gm2108-201ENSMUST00000165058 2177 ntBASIC11.74□□□□□ -0.53
Cux1P53564 Idh1-203ENSMUST00000169032 2283 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Cux1P53564 Olfr410-202ENSMUST00000213831 5070 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Fmo5-202ENSMUST00000107049 2583 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Cux1P53564 Olfr523-202ENSMUST00000209314 3677 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Olfr1396-201ENSMUST00000060398 3946 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Ptprc-207ENSMUST00000183301 5074 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 R3hdm2-204ENSMUST00000105250 3975 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Cux1P53564 Olfr632-203ENSMUST00000214711 3282 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cux1P53564 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Gm26945-201ENSMUST00000183191 2011 ntBASIC11.73□□□□□ -0.53
Cux1P53564 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Aebp1-201ENSMUST00000102923 3831 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Gm43080-201ENSMUST00000199006 2643 ntBASIC11.73□□□□□ -0.53
Cux1P53564 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Gm17170-201ENSMUST00000112785 316 ntBASIC11.73□□□□□ -0.53
Cux1P53564 Gm12375-201ENSMUST00000119331 921 ntBASIC11.73□□□□□ -0.53
Cux1P53564 Gm24680-201ENSMUST00000158759 126 ntBASIC11.73□□□□□ -0.53
Cux1P53564 Cyp2c53-ps-201ENSMUST00000175649 897 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Gm43846-201ENSMUST00000200502 932 ntBASIC11.73□□□□□ -0.53
Cux1P53564 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC11.73□□□□□ -0.53
Cux1P53564 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC11.73□□□□□ -0.53
Cux1P53564 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC11.73□□□□□ -0.53
Cux1P53564 Klre1-201ENSMUST00000053708 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Rtkn2-202ENSMUST00000105437 3932 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Cux1P53564 Gm15601-201ENSMUST00000122972 4033 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Olfr156-204ENSMUST00000215406 1850 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Cux1P53564 Slc16a7-201ENSMUST00000063318 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Tph2-201ENSMUST00000006949 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Gm43189-201ENSMUST00000196040 3069 ntBASIC11.73□□□□□ -0.53
Cux1P53564 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC11.73□□□□□ -0.53
Cux1P53564 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Pik3r4-210ENSMUST00000191268 4756 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Slc35b4-201ENSMUST00000019143 6253 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Nwd1-201ENSMUST00000093427 7840 ntTSL 5 BASIC11.73□□□□□ -0.53
Cux1P53564 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Cux1P53564 Sptan1-208ENSMUST00000129241 7585 ntTSL 5 BASIC11.73□□□□□ -0.53
Cux1P53564 Aldh1l1-203ENSMUST00000130418 4175 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Gm45163-201ENSMUST00000207606 3987 ntTSL 5 BASIC11.72□□□□□ -0.53
Cux1P53564 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Mynn-201ENSMUST00000047502 3394 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Gm12661-201ENSMUST00000118780 3335 ntBASIC11.72□□□□□ -0.53
Cux1P53564 Gm30414-201ENSMUST00000194886 2596 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Rimbp2-205ENSMUST00000199537 6966 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Ddx18-201ENSMUST00000001724 2258 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Mllt3-202ENSMUST00000126353 1956 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Gm44093-201ENSMUST00000204381 1802 ntBASIC11.72□□□□□ -0.53
Cux1P53564 AC133598.5-201ENSMUST00000224937 1517 ntBASIC11.72□□□□□ -0.53
Cux1P53564 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Cux1P53564 Gm15293-201ENSMUST00000110754 418 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cux1P53564 Gm14826-201ENSMUST00000121284 901 ntBASIC11.72□□□□□ -0.53
Cux1P53564 Atxn3-205ENSMUST00000161011 1000 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC11.72□□□□□ -0.53
Cux1P53564 Mir3085-201ENSMUST00000175493 89 ntBASIC11.72□□□□□ -0.53
Cux1P53564 Odaph-201ENSMUST00000178614 760 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Gm8305-201ENSMUST00000180022 1195 ntBASIC11.72□□□□□ -0.53
Cux1P53564 Gm29008-201ENSMUST00000189387 298 ntBASIC11.72□□□□□ -0.53
Cux1P53564 Gm42782-201ENSMUST00000197286 522 ntBASIC11.72□□□□□ -0.53
Cux1P53564 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC11.72□□□□□ -0.53
Cux1P53564 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC11.72□□□□□ -0.53
Cux1P53564 AC159188.3-201ENSMUST00000224199 880 ntBASIC11.72□□□□□ -0.53
Cux1P53564 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Krtap6-1-201ENSMUST00000076906 594 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Cux1P53564 Bivm-202ENSMUST00000114709 3570 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Chrna2-201ENSMUST00000022620 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Naa25-201ENSMUST00000042163 5447 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Pcyt1a-201ENSMUST00000079791 4789 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Cmtr1-201ENSMUST00000024816 6380 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cux1P53564 Olfr305-204ENSMUST00000216700 3734 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Cux1P53564 Sgk2-202ENSMUST00000117123 3034 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Mbnl3-204ENSMUST00000136404 1632 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Cux1P53564 Adgrg7-201ENSMUST00000023437 2698 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Slc5a9-203ENSMUST00000102721 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Cux1P53564 Mbd5-203ENSMUST00000112754 5978 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Cux1P53564 Gm7842-201ENSMUST00000217691 1379 ntBASIC11.71□□□□□ -0.53
Cux1P53564 Spata48-202ENSMUST00000109678 753 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Cux1P53564 Gm25617-201ENSMUST00000179548 133 ntBASIC11.71□□□□□ -0.53
Cux1P53564 Gm5272-201ENSMUST00000182730 982 ntBASIC11.71□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms