Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Dgkh-204ENSMUST00000227767 3319 ntBASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Patj-207ENSMUST00000107034 4799 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Atp6v1a-202ENSMUST00000114666 4234 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Fam107b-204ENSMUST00000115054 601 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Cav1-205ENSMUST00000115456 995 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm11850-201ENSMUST00000119679 479 ntBASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm14155-201ENSMUST00000127230 587 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Mir1930-201ENSMUST00000158799 84 ntBASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm6556-201ENSMUST00000181118 362 ntTSL 5 BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm27373-201ENSMUST00000184017 184 ntBASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm4870-201ENSMUST00000198525 1251 ntBASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm44983-201ENSMUST00000208121 463 ntTSL 3 BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm43621-201ENSMUST00000202733 2022 ntBASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Gm39244-201ENSMUST00000209663 1940 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Ccdc180J3QNE4 Cyfip2-201ENSMUST00000093165 6604 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 A630072L19Rik-202ENSMUST00000221309 1519 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Arhgap17-204ENSMUST00000205262 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Stk11ip-202ENSMUST00000113553 4153 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Rnf19a-203ENSMUST00000228358 3452 ntBASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Emc1-202ENSMUST00000082262 6226 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 9630013K17Rik-201ENSMUST00000146915 1072 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Olfr819-201ENSMUST00000167974 963 ntAPPRIS P2 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Olfr247-201ENSMUST00000170920 963 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm42421-201ENSMUST00000172367 719 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm3611-201ENSMUST00000173687 877 ntBASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm5039-201ENSMUST00000177747 435 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Mir7084-201ENSMUST00000183876 70 ntBASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm17965-201ENSMUST00000193904 517 ntBASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 9230114K14Rik-204ENSMUST00000199805 695 ntTSL 3 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm42963-201ENSMUST00000202943 1217 ntBASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Olfr1357-203ENSMUST00000205085 1012 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm21936-201ENSMUST00000221442 435 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Gm10310-201ENSMUST00000095239 963 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Rnf144b-202ENSMUST00000110111 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Syt11-201ENSMUST00000090945 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Ccdc180J3QNE4 Tbc1d24-204ENSMUST00000167791 4383 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc180J3QNE4 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc180J3QNE4 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc180J3QNE4 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc180J3QNE4 BC085271-201ENSMUST00000191852 1487 ntBASIC13.96□□□□□ -0.18
Ccdc180J3QNE4 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Ccdc180J3QNE4 Gm44883-201ENSMUST00000206063 3258 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Olfr169-204ENSMUST00000216070 2328 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Eci3-201ENSMUST00000021853 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm14279-201ENSMUST00000117142 332 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Rpl35a-ps2-201ENSMUST00000117444 333 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm10243-201ENSMUST00000117571 333 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Rpl35a-ps4-201ENSMUST00000121779 333 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Rpl35a-ps3-201ENSMUST00000147311 333 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Rpl35a-ps6-201ENSMUST00000148282 333 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm5656-201ENSMUST00000171020 1096 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 1700028D13Rik-202ENSMUST00000187272 675 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm8004-201ENSMUST00000187782 617 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 C730036E19Rik-201ENSMUST00000188305 1102 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm37526-201ENSMUST00000194640 619 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm30646-201ENSMUST00000207662 180 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm10247-201ENSMUST00000090395 333 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Olfr1221-204ENSMUST00000217635 3753 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Usp7-208ENSMUST00000161046 4003 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Vmn1r52-203ENSMUST00000227100 2307 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Lilrb4a-203ENSMUST00000219696 1441 ntAPPRIS P5 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Jakmip2-201ENSMUST00000082254 3511 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Ube2k-207ENSMUST00000202082 4506 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Cep83os-201ENSMUST00000181906 6566 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Phf8-201ENSMUST00000046950 5728 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Fn3k-203ENSMUST00000103014 3841 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm7821-201ENSMUST00000117111 788 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm13798-201ENSMUST00000118285 139 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm15081-201ENSMUST00000119794 844 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm15153-201ENSMUST00000119867 274 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm14728-201ENSMUST00000122196 492 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Olfr636-ps1-201ENSMUST00000134827 935 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm22533-201ENSMUST00000158821 274 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm38177-201ENSMUST00000192213 1040 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm43560-201ENSMUST00000198100 773 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm42813-201ENSMUST00000200057 615 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 Gm44902-201ENSMUST00000206177 805 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 4930563J15Rik-202ENSMUST00000219752 560 ntTSL 3 BASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 AC159188.3-201ENSMUST00000224199 880 ntBASIC13.95□□□□□ -0.18
Ccdc180J3QNE4 AC138284.3-201ENSMUST00000217345 4663 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms