Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm26351-201ENSMUST00000157532 232 ntBASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 9330159M07Rik-204ENSMUST00000188156 737 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Gm30692-201ENSMUST00000208709 801 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Gm45283-201ENSMUST00000210593 628 ntBASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Rnf212-206ENSMUST00000212212 924 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Gm32688-201ENSMUST00000213849 585 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Lyrm2-201ENSMUST00000062802 465 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Cytl1-201ENSMUST00000073554 974 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Nolc1-201ENSMUST00000165017 3634 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Stox2-202ENSMUST00000110367 3424 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Sfmbt2-205ENSMUST00000116594 7821 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Gm33035-201ENSMUST00000219854 1718 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 D030068K23Rik-204ENSMUST00000212085 1351 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Pdzd9-201ENSMUST00000033178 2180 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Trim29Q8R2Q0 Epb41l5-203ENSMUST00000163147 3370 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 CT009711.1-201ENSMUST00000223992 3040 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Amy1-202ENSMUST00000106540 1771 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Grm8-203ENSMUST00000115324 3299 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm19938-201ENSMUST00000192692 3259 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm14032-201ENSMUST00000117686 1026 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Rpl9-ps2-201ENSMUST00000120821 577 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm11186-201ENSMUST00000137096 1179 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm26641-201ENSMUST00000181499 954 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Sos2-203ENSMUST00000182396 3963 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm8167-201ENSMUST00000183320 958 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm29143-201ENSMUST00000189462 201 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm43158-201ENSMUST00000198484 1555 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm42489-201ENSMUST00000198964 669 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm27680-202ENSMUST00000199221 807 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 AC154307.1-201ENSMUST00000214799 90 ntBASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 CT009718.2-201ENSMUST00000221408 1428 ntTSL 5 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Gm4956-201ENSMUST00000082032 1148 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Slc8a1-201ENSMUST00000086538 2913 ntAPPRIS P2 TSL 5 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Htr1d-201ENSMUST00000088677 2904 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Ighv1-13-201ENSMUST00000095364 294 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Prkacb-201ENSMUST00000005164 4001 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Ssr3-201ENSMUST00000029414 2957 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Inpp5d-208ENSMUST00000167032 4125 ntTSL 2 BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Trim29Q8R2Q0 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Trim29Q8R2Q0 Cast-207ENSMUST00000222588 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -1
Trim29Q8R2Q0 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC8.84□□□□□ -1
Trim29Q8R2Q0 Stx8-202ENSMUST00000021286 1638 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Kdm5d-207ENSMUST00000189069 2177 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 3830406C13Rik-206ENSMUST00000223762 2292 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm37968-201ENSMUST00000195131 3201 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Vipas39-201ENSMUST00000021426 2509 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 AC129208.1-201ENSMUST00000227474 2906 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Kcna2-203ENSMUST00000197470 4370 ntAPPRIS P1 TSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm26512-201ENSMUST00000181874 3042 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Pex3-203ENSMUST00000105541 1072 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm13526-201ENSMUST00000117970 189 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm16418-201ENSMUST00000118577 171 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm15753-201ENSMUST00000119241 1062 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm12955-201ENSMUST00000119689 957 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm12297-201ENSMUST00000121380 979 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 4930555O08Rik-201ENSMUST00000122821 668 ntTSL 1 (best) BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Cldn20-201ENSMUST00000168560 660 ntAPPRIS P1 BASIC8.83□□□□□ -1
Trim29Q8R2Q0 Mir6919-201ENSMUST00000185146 62 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm17970-201ENSMUST00000192199 685 ntBASIC8.83□□□□□ -1
Trim29Q8R2Q0 Gm20670-201ENSMUST00000206468 338 ntTSL 3 BASIC8.83□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms