Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Dis3l-202ENSMUST00000113890 3224 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 AC164883.2-201ENSMUST00000227931 3815 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Ola1-203ENSMUST00000112055 1251 ntTSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm13229-201ENSMUST00000118238 340 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm15047-201ENSMUST00000118891 454 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm12727-201ENSMUST00000119885 359 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Dnase1-202ENSMUST00000120009 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm12634-201ENSMUST00000122157 992 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm14040-201ENSMUST00000139058 697 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm23117-201ENSMUST00000158482 108 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm7707-201ENSMUST00000165950 1156 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Mir8095-201ENSMUST00000185103 129 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm7200-201ENSMUST00000188426 1163 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm29562-201ENSMUST00000190113 904 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm38203-201ENSMUST00000191815 245 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm18131-201ENSMUST00000199241 449 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm4270-201ENSMUST00000209666 406 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm5086-203ENSMUST00000210897 1136 ntTSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 CT025685.1-201ENSMUST00000213716 150 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Cinp-209ENSMUST00000222457 723 ntTSL 2 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 AC126939.4-201ENSMUST00000225360 743 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 AC159205.7-201ENSMUST00000225988 692 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm5316-201ENSMUST00000050391 270 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Spink6-201ENSMUST00000068473 587 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm42907-201ENSMUST00000199793 2148 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Olfr622-204ENSMUST00000216570 2149 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm6356-201ENSMUST00000166618 1757 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Dgkh-204ENSMUST00000227767 3319 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm44228-201ENSMUST00000204888 2026 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 D830032E09Rik-201ENSMUST00000186875 2193 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Gm28649-201ENSMUST00000189153 1581 ntBASIC9.8□□□□□ -0.84
Ccdc60Q8C4J0 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Rnase4-202ENSMUST00000169895 1460 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Nasp-203ENSMUST00000081182 1461 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Zzz3-203ENSMUST00000106101 7539 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Zfp426-210ENSMUST00000167457 4262 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm37109-201ENSMUST00000195475 2254 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Afap1l2-203ENSMUST00000122359 3667 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Lrrfip2-206ENSMUST00000197241 1500 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm14509-201ENSMUST00000117312 1286 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 4930594O21Rik-202ENSMUST00000144981 682 ntTSL 3 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm28821-201ENSMUST00000185637 610 ntTSL 3 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm40538-201ENSMUST00000220610 578 ntTSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm40853-201ENSMUST00000221342 582 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm9255-201ENSMUST00000223225 581 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 AC139323.1-201ENSMUST00000223370 1040 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Cd74-201ENSMUST00000050487 1218 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Alox5ap-201ENSMUST00000071130 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Krtap8-1-201ENSMUST00000072280 579 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm22748-201ENSMUST00000082493 136 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Dab2-204ENSMUST00000110664 4450 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Olfr1425-202ENSMUST00000214918 2178 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Rad51b-203ENSMUST00000218039 2187 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm43254-201ENSMUST00000199187 2491 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Ncor1-205ENSMUST00000101067 7243 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Dlgap2-201ENSMUST00000043279 3580 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm44509-201ENSMUST00000205400 1324 ntBASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Gm29154-258ENSMUST00000217560 1733 ntTSL 5 BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Ccdc60Q8C4J0 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Cyfip1-202ENSMUST00000085255 4195 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Sema6a-206ENSMUST00000135790 4339 ntTSL 5 BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Pwp2-201ENSMUST00000042556 3872 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Gm24373-201ENSMUST00000104393 132 ntBASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Gm13742-201ENSMUST00000118805 457 ntBASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Gm13224-201ENSMUST00000119586 94 ntBASIC9.78□□□□□ -0.84
Ccdc60Q8C4J0 Gm12123-201ENSMUST00000120348 472 ntBASIC9.78□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms