Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Tctex1d1-202ENSMUST00000116317 1772 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Wdr72-201ENSMUST00000055879 5196 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm15990-201ENSMUST00000132223 3321 ntTSL 5 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Ctdspl2-203ENSMUST00000110574 1616 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Cyfip2-202ENSMUST00000093166 6298 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Slc38a9-201ENSMUST00000052514 8910 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm9256-201ENSMUST00000198106 1420 ntBASIC10.87□□□□□ -0.67
Usp47Q8BY87 Hipk1-202ENSMUST00000106845 3967 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm14248-201ENSMUST00000117790 544 ntBASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm11928-201ENSMUST00000119323 437 ntBASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm14826-201ENSMUST00000121284 901 ntBASIC10.87□□□□□ -0.67
Usp47Q8BY87 Hnf1aos1-203ENSMUST00000131845 740 ntTSL 3 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 AI480526-201ENSMUST00000159072 957 ntTSL 2 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm44196-202ENSMUST00000204186 812 ntTSL 3 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 5930435M05Rik-202ENSMUST00000207936 414 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm32515-201ENSMUST00000219396 350 ntTSL 2 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 AC160060.2-201ENSMUST00000220151 811 ntTSL 5 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 RMST_1.1-213ENSMUST00000220288 792 ntTSL 5 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Gm18503-201ENSMUST00000220340 728 ntBASIC10.87□□□□□ -0.67
Usp47Q8BY87 Olfr1445-201ENSMUST00000049624 1001 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Olfr49-201ENSMUST00000059996 1030 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Zfp827-202ENSMUST00000098614 7581 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Has3-201ENSMUST00000034385 5912 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Usp47Q8BY87 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Ddx6-203ENSMUST00000217034 6029 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Wdr20-201ENSMUST00000095410 2384 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm7978-201ENSMUST00000178552 1446 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Txndc16-207ENSMUST00000147853 2816 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Myh15-201ENSMUST00000168680 6340 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Ccdc141-207ENSMUST00000164114 6222 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm29113-201ENSMUST00000185991 3432 ntBASIC10.86□□□□□ -0.67
Usp47Q8BY87 Fetub-202ENSMUST00000116625 1338 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 AC159624.1-201ENSMUST00000217762 1344 ntBASIC10.86□□□□□ -0.67
Usp47Q8BY87 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm15209-201ENSMUST00000117703 400 ntBASIC10.86□□□□□ -0.67
Usp47Q8BY87 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm9697-201ENSMUST00000147052 997 ntBASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm15915-201ENSMUST00000147379 908 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm5723-201ENSMUST00000203096 432 ntBASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm34533-201ENSMUST00000209249 552 ntTSL 5 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gng2-201ENSMUST00000055100 572 ntAPPRIS P1 TSL 3 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm25926-201ENSMUST00000082899 160 ntBASIC10.86□□□□□ -0.67
Usp47Q8BY87 Rhox4b-201ENSMUST00000096458 887 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm5113-201ENSMUST00000085668 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Ank1-213ENSMUST00000141784 6566 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Slc24a2-202ENSMUST00000107155 2171 ntTSL 5 BASIC10.86□□□□□ -0.67
Usp47Q8BY87 Fbxo32-201ENSMUST00000022986 6976 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Npr3-204ENSMUST00000228489 1969 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm26785-201ENSMUST00000181775 2914 ntTSL 3 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Katnb1-201ENSMUST00000034239 3777 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Ptpn3-201ENSMUST00000075637 6369 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Lamb3-202ENSMUST00000159955 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm44117-201ENSMUST00000204442 1758 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 Ighv7-4-201ENSMUST00000103477 360 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm8916-201ENSMUST00000119732 949 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm14547-201ENSMUST00000138341 371 ntTSL 5 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Plet1-202ENSMUST00000188047 739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm38254-201ENSMUST00000192276 1009 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm43387-201ENSMUST00000196896 1066 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 1700040L08Rik-201ENSMUST00000205011 541 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 AC144783.1-201ENSMUST00000219103 960 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 4930520K02Rik-201ENSMUST00000219522 388 ntTSL 3 BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Atp8b3-202ENSMUST00000219648 524 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Gm18631-201ENSMUST00000223125 1043 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 AC165155.1-201ENSMUST00000228932 445 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 Exoc5-207ENSMUST00000162175 12699 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 CT010505.3-201ENSMUST00000227835 1651 ntBASIC10.85□□□□□ -0.67
Usp47Q8BY87 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Usp47Q8BY87 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms