Protein–RNA interactions for Protein: P53798

Fdft1, Squalene synthase, mousemouse

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fdft1P53798 CU024890.1-201ENSMUST00000221361 2019 ntBASIC7.73□□□□□ -1.17
Fdft1P53798 Olfr1392-207ENSMUST00000217275 3098 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Fdft1P53798 Gas2l3-202ENSMUST00000105298 6305 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm6011-201ENSMUST00000211736 1796 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm14546-201ENSMUST00000138275 1647 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm23358-201ENSMUST00000103887 110 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm22150-201ENSMUST00000104447 135 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm14036-201ENSMUST00000118248 480 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm8802-201ENSMUST00000118633 740 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm15355-201ENSMUST00000118929 285 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm11585-201ENSMUST00000120901 569 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm15006-201ENSMUST00000121419 1122 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC7.72□□□□□ -1.17
Fdft1P53798 Lrrc8dos-201ENSMUST00000135958 586 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Apela-202ENSMUST00000142822 975 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Banf2os-202ENSMUST00000145504 386 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Mir1932-201ENSMUST00000157390 90 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm17051-201ENSMUST00000170787 487 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 4921523L03Rik-201ENSMUST00000175729 1186 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Rnf170-ps-201ENSMUST00000181188 859 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm18970-201ENSMUST00000186040 938 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm6750-201ENSMUST00000189273 268 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC7.72□□□□□ -1.17
Fdft1P53798 Pisrt1-201ENSMUST00000195532 515 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 FAM237A-201ENSMUST00000226288 1105 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Fdft1P53798 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Krtap3-1-201ENSMUST00000055502 604 ntAPPRIS P1 BASIC7.72□□□□□ -1.17
Fdft1P53798 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC7.72□□□□□ -1.17
Fdft1P53798 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC7.72□□□□□ -1.17
Fdft1P53798 Xlr5a-201ENSMUST00000078574 1650 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Kbtbd8-201ENSMUST00000032107 4869 ntAPPRIS P1 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 AC112680.1-201ENSMUST00000215435 1349 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Lgals9-202ENSMUST00000108268 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Mrgprx2-202ENSMUST00000186394 1930 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Gm43123-201ENSMUST00000201893 3471 ntBASIC7.72□□□□□ -1.17
Fdft1P53798 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC7.72□□□□□ -1.17
Fdft1P53798 Mterf1b-201ENSMUST00000177258 1368 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Fdft1P53798 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC7.71□□□□□ -1.17
Fdft1P53798 Slc12a1-203ENSMUST00000110495 4642 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.17
Fdft1P53798 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
Fdft1P53798 Vmn2r41-201ENSMUST00000168807 3617 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
Fdft1P53798 Gm38014-201ENSMUST00000193349 2612 ntBASIC7.71□□□□□ -1.17
Fdft1P53798 Gm44249-201ENSMUST00000204538 1805 ntBASIC7.71□□□□□ -1.17
Fdft1P53798 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
Fdft1P53798 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Fdft1P53798 Igkv4-72-201ENSMUST00000103346 402 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm12604-201ENSMUST00000118382 380 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Gm9392-201ENSMUST00000119337 554 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Defa-ps3-201ENSMUST00000142705 282 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Gm16116-201ENSMUST00000159472 430 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm16103-201ENSMUST00000163003 1279 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Gm5973-201ENSMUST00000178542 496 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Cnih4-205ENSMUST00000193907 531 ntTSL 2 BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm38289-201ENSMUST00000194273 597 ntTSL 5 BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm36996-201ENSMUST00000194466 250 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Mcee-204ENSMUST00000206882 391 ntTSL 2 BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm44743-201ENSMUST00000209062 386 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Gm17875-201ENSMUST00000216005 941 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Gm2915-201ENSMUST00000222565 787 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Olfr1494-201ENSMUST00000051768 948 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Fdft1P53798 Spink10-201ENSMUST00000055725 1113 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Olfr1340-202ENSMUST00000213436 1948 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Fdft1P53798 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
Fdft1P53798 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC7.71□□□□□ -1.18
Fdft1P53798 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC7.71□□□□□ -1.18
Fdft1P53798 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC7.71□□□□□ -1.18
Fdft1P53798 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Gdi2-209ENSMUST00000223396 4303 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Mmp3-201ENSMUST00000034497 1801 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Fdft1P53798 Gm6819-201ENSMUST00000185325 1891 ntBASIC7.7□□□□□ -1.18
Fdft1P53798 Zbtb43-202ENSMUST00000095035 4925 ntTSL 5 BASIC7.7□□□□□ -1.18
Fdft1P53798 Far1-201ENSMUST00000033018 4962 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Fdft1P53798 9530027J09Rik-201ENSMUST00000180584 1684 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Fdft1P53798 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Fdft1P53798 Ankef1-202ENSMUST00000121717 2875 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms