Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Olfr221-201ENSMUST00000052560 2741 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Cep57l1-210ENSMUST00000190022 1949 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Mtfr1-202ENSMUST00000117529 1896 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC7.88□□□□□ -1.15
HttP42859 Gm14869-201ENSMUST00000119007 884 ntBASIC7.88□□□□□ -1.15
HttP42859 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC7.88□□□□□ -1.15
HttP42859 Pfn2-204ENSMUST00000122210 810 ntTSL 3 BASIC7.88□□□□□ -1.15
HttP42859 Gm5125-201ENSMUST00000148614 624 ntBASIC7.88□□□□□ -1.15
HttP42859 Rps12-ps22-201ENSMUST00000179382 402 ntBASIC7.88□□□□□ -1.15
HttP42859 Frmd8os-202ENSMUST00000187697 516 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC7.88□□□□□ -1.15
HttP42859 4930435C17Rik-202ENSMUST00000210759 974 ntTSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Olfr1224-ps1-202ENSMUST00000099793 1212 ntAPPRIS P1 TSL 3 BASIC7.88□□□□□ -1.15
HttP42859 Gm44443-201ENSMUST00000204396 5633 ntBASIC7.88□□□□□ -1.15
HttP42859 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Asxl2-207ENSMUST00000153102 4462 ntAPPRIS P2 TSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 D630033O11Rik-205ENSMUST00000210802 2761 ntTSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC7.88□□□□□ -1.15
HttP42859 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Akap8-201ENSMUST00000002699 3695 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.88□□□□□ -1.15
HttP42859 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Rin3-204ENSMUST00000133820 3755 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
HttP42859 Gm28173-201ENSMUST00000191190 1496 ntTSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC7.88□□□□□ -1.15
HttP42859 Olfr460-202ENSMUST00000216942 3370 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HttP42859 Gm13622-201ENSMUST00000120658 433 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm13642-201ENSMUST00000121697 381 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC7.87□□□□□ -1.15
HttP42859 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.87□□□□□ -1.15
HttP42859 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Tmem43-201ENSMUST00000032183 2903 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HttP42859 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.87□□□□□ -1.15
HttP42859 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Gm10118-201ENSMUST00000079279 2569 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HttP42859 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC7.87□□□□□ -1.15
HttP42859 Dmrtc1a-203ENSMUST00000120808 1061 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Gm7745-201ENSMUST00000182235 973 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC7.87□□□□□ -1.15
HttP42859 Pafah1b1-ps2-201ENSMUST00000207209 1223 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm33312-201ENSMUST00000222443 332 ntBASIC7.87□□□□□ -1.15
HttP42859 AC163651.1-201ENSMUST00000222500 372 ntBASIC7.87□□□□□ -1.15
HttP42859 Utp14b-202ENSMUST00000151622 3685 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Sirpb1c-202ENSMUST00000108349 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Adhfe1-203ENSMUST00000144177 3239 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Serping1-201ENSMUST00000023994 1768 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Lin54-204ENSMUST00000137750 4056 ntTSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Gm43143-201ENSMUST00000196083 2023 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm44684-201ENSMUST00000205388 2926 ntTSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.87□□□□□ -1.15
HttP42859 Pex5l-208ENSMUST00000192093 3421 ntAPPRIS P3 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Gm22774-201ENSMUST00000102084 109 ntBASIC7.87□□□□□ -1.15
HttP42859 Klra5-202ENSMUST00000118060 1279 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Gm15311-201ENSMUST00000119682 282 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm15305-201ENSMUST00000120354 288 ntBASIC7.87□□□□□ -1.15
HttP42859 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
HttP42859 Gm11415-201ENSMUST00000128214 480 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Gm3760-201ENSMUST00000167475 804 ntBASIC7.87□□□□□ -1.15
HttP42859 Obox1-202ENSMUST00000172463 783 ntAPPRIS P1 TSL 3 BASIC7.87□□□□□ -1.15
HttP42859 Gm4152-201ENSMUST00000172675 259 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm23799-201ENSMUST00000175559 120 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm3047-202ENSMUST00000177998 618 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Gm4904-201ENSMUST00000178243 1195 ntBASIC7.87□□□□□ -1.15
HttP42859 Gm8297-203ENSMUST00000178389 618 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Gm8159-203ENSMUST00000179231 618 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC7.87□□□□□ -1.15
HttP42859 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
HttP42859 Mapk9-202ENSMUST00000043321 1297 ntAPPRIS ALT1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Gm35206-201ENSMUST00000217945 1642 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
HttP42859 Paqr7-202ENSMUST00000095074 3550 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Gm37373-201ENSMUST00000194005 2812 ntBASIC7.86□□□□□ -1.15
HttP42859 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Kcnj10-201ENSMUST00000056136 5407 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Hipk2-207ENSMUST00000162359 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Timd2-202ENSMUST00000109225 2236 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
HttP42859 Gm42460-201ENSMUST00000198863 2567 ntBASIC7.86□□□□□ -1.15
HttP42859 Snord88a-201ENSMUST00000116723 90 ntBASIC7.86□□□□□ -1.15
HttP42859 Gm8250-201ENSMUST00000117398 774 ntBASIC7.86□□□□□ -1.15
HttP42859 Pcnp-204ENSMUST00000122253 792 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 81.4 ms