Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Cbx3-ps6-201ENSMUST00000181108 552 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm28180-201ENSMUST00000189608 722 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Ing5-203ENSMUST00000190476 918 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm31406-201ENSMUST00000192297 671 ntTSL 2 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm32569-201ENSMUST00000193955 604 ntTSL 2 BASIC7.61□□□□□ -1.19
BdnfP21237 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm5981-201ENSMUST00000199912 487 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Gm43553-201ENSMUST00000200900 685 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Gm43782-201ENSMUST00000202790 229 ntTSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm44203-201ENSMUST00000203134 307 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Rpl10-ps5-201ENSMUST00000212707 642 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Gm3011-201ENSMUST00000215669 582 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Gm8948-201ENSMUST00000216371 370 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm3379-201ENSMUST00000222259 642 ntBASIC7.61□□□□□ -1.19
BdnfP21237 AC122533.2-201ENSMUST00000223772 545 ntBASIC7.61□□□□□ -1.19
BdnfP21237 AC114585.2-203ENSMUST00000228400 339 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Med6-201ENSMUST00000002756 1003 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gstm5-201ENSMUST00000004134 945 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
BdnfP21237 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Trim66-202ENSMUST00000106739 9250 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC7.61□□□□□ -1.19
BdnfP21237 EPPK1-201ENSMUST00000226781 12325 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
BdnfP21237 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Marf1-201ENSMUST00000090300 7765 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Adgre1-202ENSMUST00000086763 3245 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm8844-201ENSMUST00000119460 2614 ntBASIC7.61□□□□□ -1.19
BdnfP21237 4933424H11Rik-201ENSMUST00000200511 2018 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Gm37249-201ENSMUST00000195185 2869 ntBASIC7.61□□□□□ -1.19
BdnfP21237 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC7.61□□□□□ -1.19
BdnfP21237 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC7.61□□□□□ -1.19
BdnfP21237 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
BdnfP21237 Lhfpl2-204ENSMUST00000121618 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Zfp280d-217ENSMUST00000184517 3919 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Gstz1-201ENSMUST00000063117 1656 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 AC154576.1-202ENSMUST00000223966 3320 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.6□□□□□ -1.19
BdnfP21237 AC122346.1-201ENSMUST00000225266 3732 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Plxdc2-202ENSMUST00000114702 2146 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 AC125487.1-201ENSMUST00000217888 1300 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Galnt7-202ENSMUST00000110316 3413 ntAPPRIS ALT2 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Gm13043-201ENSMUST00000178489 2055 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Gm12780-201ENSMUST00000122458 645 ntBASIC7.6□□□□□ -1.19
BdnfP21237 B430319H21Rik-201ENSMUST00000123420 734 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC7.6□□□□□ -1.19
BdnfP21237 Dxo-208ENSMUST00000174092 738 ntTSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Gm28923-201ENSMUST00000187755 322 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC7.6□□□□□ -1.19
BdnfP21237 Gm23927-202ENSMUST00000199928 216 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Gm18973-201ENSMUST00000205814 511 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Gm18504-201ENSMUST00000220917 929 ntBASIC7.6□□□□□ -1.19
BdnfP21237 AC124465.1-201ENSMUST00000222349 746 ntTSL 3 BASIC7.6□□□□□ -1.19
BdnfP21237 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Nqo2-204ENSMUST00000222740 995 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 AC100209.1-201ENSMUST00000225562 409 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC7.6□□□□□ -1.19
BdnfP21237 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
BdnfP21237 Clec3a-201ENSMUST00000009018 591 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
BdnfP21237 Gm29311-202ENSMUST00000189721 1532 ntTSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Gm28791-201ENSMUST00000185888 1779 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Gm6786-201ENSMUST00000203165 1915 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 Gm5721-201ENSMUST00000119845 1696 ntBASIC7.6□□□□□ -1.19
BdnfP21237 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC7.6□□□□□ -1.19
BdnfP21237 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC7.6□□□□□ -1.19
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms