Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm8428-201ENSMUST00000159919 1784 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gngt2-202ENSMUST00000100532 573 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm27509-201ENSMUST00000102400 79 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm15209-201ENSMUST00000117703 400 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm13161-201ENSMUST00000120609 559 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm13726-201ENSMUST00000121278 794 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm15845-201ENSMUST00000130244 996 ntTSL 2 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm11399-201ENSMUST00000131021 324 ntTSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Dctd-206ENSMUST00000174379 381 ntTSL 3 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Rpl41-201ENSMUST00000176010 582 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Rpl41-204ENSMUST00000176906 509 ntAPPRIS ALT2 TSL 3 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm26957-201ENSMUST00000182645 977 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm5835-201ENSMUST00000185806 1270 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm28428-201ENSMUST00000188886 697 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Shisa5-207ENSMUST00000197483 534 ntTSL 3 BASIC6.27□□□□□ -1.41
Hmgb3O54879 1700041I07Rik-201ENSMUST00000197536 435 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm42698-201ENSMUST00000197790 762 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm42628-201ENSMUST00000198498 764 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm7902-201ENSMUST00000198842 947 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm19172-201ENSMUST00000203170 1246 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 4930563H07Rik-201ENSMUST00000203494 628 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm17909-201ENSMUST00000207587 907 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Scn2a-201ENSMUST00000028377 8935 ntAPPRIS P3 TSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Olfr412-201ENSMUST00000077794 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm6505-201ENSMUST00000094335 648 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Dab2-201ENSMUST00000078019 3793 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Ank3-228ENSMUST00000182692 3833 ntTSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm34777-201ENSMUST00000219688 2505 ntTSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Kif20a-201ENSMUST00000166044 3567 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 Ampd3-208ENSMUST00000213373 3337 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Gm37618-201ENSMUST00000192891 3075 ntBASIC6.27□□□□□ -1.41
Hmgb3O54879 Parp8-201ENSMUST00000022239 3098 ntTSL 5 BASIC6.27□□□□□ -1.41
Hmgb3O54879 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Hmgb3O54879 D430020J02Rik-201ENSMUST00000220477 2941 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Pecam1-207ENSMUST00000183610 3006 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Snhg17-209ENSMUST00000186993 3144 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Yy2-201ENSMUST00000065806 2867 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hmgb3O54879 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Olfr550-202ENSMUST00000216524 4957 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Serpina3a-203ENSMUST00000185595 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm38697-201ENSMUST00000198061 1746 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Trim75-201ENSMUST00000095295 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Maml2-203ENSMUST00000177755 2264 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm14427-201ENSMUST00000117183 635 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm11628-201ENSMUST00000117568 171 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm5761-201ENSMUST00000119238 834 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm12206-201ENSMUST00000119795 601 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm6798-201ENSMUST00000119961 360 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm15763-201ENSMUST00000120136 403 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm14617-201ENSMUST00000128053 798 ntTSL 5 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm15938-201ENSMUST00000150079 635 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm23827-201ENSMUST00000157116 145 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm8868-201ENSMUST00000173591 577 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Mlip-212ENSMUST00000184848 1019 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Olfr320-201ENSMUST00000204718 928 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Rps11-204ENSMUST00000211725 493 ntTSL 5 BASIC6.26□□□□□ -1.41
Hmgb3O54879 AC125543.2-201ENSMUST00000222114 105 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 CT030170.7-201ENSMUST00000223372 103 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 CT025630.3-201ENSMUST00000228798 835 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Olfr770-201ENSMUST00000062314 936 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm26264-201ENSMUST00000083278 159 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm22830-201ENSMUST00000083772 130 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Defa28-201ENSMUST00000098887 400 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Zfp790-201ENSMUST00000032796 3376 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Apool-201ENSMUST00000026599 1359 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Cdc42-202ENSMUST00000051477 2108 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
Hmgb3O54879 Gm45358-201ENSMUST00000209492 2305 ntBASIC6.26□□□□□ -1.41
Hmgb3O54879 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
Hmgb3O54879 Myo1h-209ENSMUST00000199567 1307 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms