Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm1140-201ENSMUST00000114675 782 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Cldn16-201ENSMUST00000115302 950 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm14864-201ENSMUST00000116164 1087 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm22953-201ENSMUST00000116724 101 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Defa-ps7-201ENSMUST00000117139 168 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Olfr997-ps1-201ENSMUST00000117353 939 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm15913-201ENSMUST00000118492 331 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm15007-201ENSMUST00000119982 710 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm15316-201ENSMUST00000121082 421 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm20452-201ENSMUST00000174686 513 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm29145-201ENSMUST00000189914 456 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm42883-201ENSMUST00000202594 222 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm8512-201ENSMUST00000215367 471 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 AC134468.2-202ENSMUST00000222820 1120 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm24696-201ENSMUST00000083878 134 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Slc2a3-201ENSMUST00000032476 3959 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Cyp1a1-202ENSMUST00000216433 2697 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Tep1-201ENSMUST00000006444 8171 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm37065-203ENSMUST00000192498 1622 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gm37673-201ENSMUST00000194880 2451 ntBASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Mkl1-201ENSMUST00000109579 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Celf2-221ENSMUST00000182706 2525 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Sf3b2Q3UJB0 Gpkow-201ENSMUST00000049896 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Olfr1221-202ENSMUST00000143255 2800 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm37373-201ENSMUST00000194005 2812 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Apobec1-203ENSMUST00000112587 2072 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm12661-201ENSMUST00000118780 3335 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Nyap2-202ENSMUST00000113494 4540 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Synrg-202ENSMUST00000092834 7115 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Baalc-201ENSMUST00000163313 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Mill1-201ENSMUST00000066780 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm26144-201ENSMUST00000104475 132 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm6743-201ENSMUST00000117345 1066 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm11880-201ENSMUST00000117612 399 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm12174-201ENSMUST00000119853 813 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm12104-201ENSMUST00000120359 979 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm371-201ENSMUST00000142240 1245 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm22408-201ENSMUST00000174925 65 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm24157-201ENSMUST00000175265 111 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm27008-202ENSMUST00000182414 604 ntTSL 3 BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Scgb2b8-ps-201ENSMUST00000188661 327 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Scgb2b13-ps-201ENSMUST00000190420 328 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm29605-201ENSMUST00000190800 292 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm37306-201ENSMUST00000193447 1233 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm7115-201ENSMUST00000193706 832 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Kitl-201ENSMUST00000020129 1260 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gm45666-201ENSMUST00000211474 277 ntTSL 5 BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Gpx4-ps2-202ENSMUST00000217344 782 ntBASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC10.21□□□□□ -0.77
Sf3b2Q3UJB0 Tbc1d24-208ENSMUST00000201089 4081 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Gm7690-201ENSMUST00000190885 1399 ntBASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 AC154747.4-203ENSMUST00000225893 1384 ntBASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Phf11a-201ENSMUST00000062307 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 AI662270-202ENSMUST00000143673 1428 ntTSL 5 BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Rhpn2-202ENSMUST00000085556 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Gm20609-201ENSMUST00000177104 1527 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Gm40893-201ENSMUST00000220507 1508 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Nek10-202ENSMUST00000112630 3348 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Gm37315-201ENSMUST00000194347 3479 ntBASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Cyp2c50-202ENSMUST00000080171 1812 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Gm26749-201ENSMUST00000181387 1933 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Gm29761-201ENSMUST00000215964 1939 ntBASIC10.21□□□□□ -0.78
Sf3b2Q3UJB0 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Gucy2d-203ENSMUST00000206435 3634 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Abr-201ENSMUST00000065028 4444 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Synj1-210ENSMUST00000170853 7012 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Igkv12-89-201ENSMUST00000103335 335 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Igkv8-27-201ENSMUST00000103381 300 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Gm25877-201ENSMUST00000104326 129 ntBASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Thg1l-202ENSMUST00000109254 2202 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Gm14772-201ENSMUST00000116562 514 ntBASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Gm11371-201ENSMUST00000120294 385 ntBASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Rps19-ps14-201ENSMUST00000121832 269 ntBASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Gm14218-201ENSMUST00000137802 595 ntTSL 5 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Rps6ka1-205ENSMUST00000157067 2637 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Txk-202ENSMUST00000169534 2344 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Gm21761-201ENSMUST00000179502 516 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC10.2□□□□□ -0.78
Sf3b2Q3UJB0 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms