Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 AC166574.2-201ENSMUST00000226751 381 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Olfr466-201ENSMUST00000058907 927 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Prss35-201ENSMUST00000036426 3444 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Palb2-203ENSMUST00000106468 3304 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Tmem63c-201ENSMUST00000110187 3327 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Parp9-202ENSMUST00000114877 2608 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm45220-201ENSMUST00000207847 2509 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 AC164437.4-202ENSMUST00000228794 2413 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Cep170-212ENSMUST00000194727 6784 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 4930551I15Rik-201ENSMUST00000219700 2143 ntTSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Il12b-202ENSMUST00000170513 1944 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Abcb11-204ENSMUST00000180142 4963 ntAPPRIS ALT2 TSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Pigr-201ENSMUST00000027675 3849 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm37314-201ENSMUST00000193545 2685 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm21129-201ENSMUST00000185932 2560 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm29258-201ENSMUST00000186842 2564 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Zbtb44-206ENSMUST00000217092 2472 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Mettl6-209ENSMUST00000228727 2388 ntAPPRIS ALT2 BASIC7.01□□□□□ -1.29
Col8a1Q00780 C2cd5-202ENSMUST00000111758 4062 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Zfp541-203ENSMUST00000210805 4084 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 4930533K18Rik-203ENSMUST00000219192 1307 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Sars-201ENSMUST00000090553 3570 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Cep57l1-205ENSMUST00000187143 1769 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Ctf2-201ENSMUST00000076091 1754 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Nol11-202ENSMUST00000106757 3098 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Gm8188-201ENSMUST00000219737 1690 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Ttc21a-201ENSMUST00000035100 4182 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Gm44080-201ENSMUST00000204451 2214 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm38110-201ENSMUST00000194594 1551 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Rps6ka6-201ENSMUST00000065976 3867 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Rtel1-202ENSMUST00000054622 4401 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Il1rap-203ENSMUST00000166294 3200 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Cenpo-205ENSMUST00000140975 4348 ntAPPRIS P2 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Zfp488-201ENSMUST00000166737 4301 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 B230354K17Rik-201ENSMUST00000181149 4897 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Etl4-203ENSMUST00000114604 4786 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Gm3742-201ENSMUST00000220907 1391 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Ppp2r3a-202ENSMUST00000075941 6786 ntTSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Eif2ak4-204ENSMUST00000110870 5116 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Dcp1a-201ENSMUST00000022535 5576 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Ttc37-201ENSMUST00000091466 5381 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col8a1Q00780 Gm22660-201ENSMUST00000104193 130 ntBASIC7□□□□□ -1.29
Col8a1Q00780 1700092K14Rik-201ENSMUST00000106604 395 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Tex35-202ENSMUST00000118207 912 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Gm13463-201ENSMUST00000119020 233 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm12748-201ENSMUST00000120763 504 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm14531-201ENSMUST00000120845 285 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm13776-201ENSMUST00000122236 1261 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Gm17046-201ENSMUST00000168078 850 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Smarca2-204ENSMUST00000175791 946 ntTSL 3 BASIC7□□□□□ -1.29
Col8a1Q00780 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm19791-201ENSMUST00000180398 859 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm29126-201ENSMUST00000188686 151 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm5251-201ENSMUST00000188959 472 ntBASIC7□□□□□ -1.29
Col8a1Q00780 1810012K16Rik-201ENSMUST00000190830 547 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Gm37883-201ENSMUST00000194970 725 ntBASIC7□□□□□ -1.29
Col8a1Q00780 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC7□□□□□ -1.29
Col8a1Q00780 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC7□□□□□ -1.29
Col8a1Q00780 Gm43985-201ENSMUST00000203283 757 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Gm32884-201ENSMUST00000205528 732 ntTSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Gm18988-201ENSMUST00000205601 746 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Spcs2-206ENSMUST00000208465 736 ntTSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Olfr1476-ps1-201ENSMUST00000208572 367 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm45319-201ENSMUST00000210220 318 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Gm8838-201ENSMUST00000212978 541 ntBASIC7□□□□□ -1.29
Col8a1Q00780 AC163354.2-201ENSMUST00000221741 649 ntTSL 3 BASIC7□□□□□ -1.29
Col8a1Q00780 A1cf-203ENSMUST00000224400 1204 ntBASIC7□□□□□ -1.29
Col8a1Q00780 AC183092.2-201ENSMUST00000225542 1153 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Ropn1-201ENSMUST00000023530 875 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Timm8b-201ENSMUST00000044051 518 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Olfr922-201ENSMUST00000051004 1132 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col8a1Q00780 Olfr844-201ENSMUST00000054106 930 ntBASIC7□□□□□ -1.29
Col8a1Q00780 Olfr1402-201ENSMUST00000060912 963 ntAPPRIS P1 BASIC7□□□□□ -1.29
Col8a1Q00780 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Rnf214-209ENSMUST00000161203 3294 ntAPPRIS ALT2 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Cdh8-204ENSMUST00000142129 2711 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Gsdmc3-202ENSMUST00000185526 2179 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Akap13-205ENSMUST00000207750 12597 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Vps8-201ENSMUST00000096191 4952 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Nin-211ENSMUST00000222237 9919 ntAPPRIS P4 TSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Scn8a-204ENSMUST00000108909 11436 ntTSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Gm3455-201ENSMUST00000204812 1954 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Gm42601-201ENSMUST00000197025 1541 ntTSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Cd101-202ENSMUST00000167086 3223 ntAPPRIS ALT2 TSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Col8a1Q00780 Cep170-215ENSMUST00000195717 6967 ntAPPRIS P2 TSL 5 BASIC7□□□□□ -1.29
Col8a1Q00780 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 54.2 ms