Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm27224-201ENSMUST00000184749 564 ntTSL 3 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Atp5g3-201ENSMUST00000018914 714 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Ighv6-2-201ENSMUST00000192430 295 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm8388-201ENSMUST00000193000 756 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm34144-201ENSMUST00000197039 259 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm42584-201ENSMUST00000201404 220 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm44203-201ENSMUST00000203134 307 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm2734-201ENSMUST00000208561 743 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm44561-201ENSMUST00000208869 264 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 AC114645.2-201ENSMUST00000214308 791 ntTSL 3 BASIC8.85□□□□□ -0.99
Hmgb1P63158 AC164087.2-201ENSMUST00000216206 1072 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 AC155644.1-201ENSMUST00000218527 890 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 AC080021.1-201ENSMUST00000228104 700 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 n-R5s28-201ENSMUST00000082814 119 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Olfr1286-201ENSMUST00000099617 918 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Specc1-203ENSMUST00000108709 6843 ntAPPRIS ALT2 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Cs-201ENSMUST00000005826 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 BC049715-203ENSMUST00000203499 2057 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Ice1-201ENSMUST00000043493 7667 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Extl2-202ENSMUST00000106501 2887 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Dennd6a-203ENSMUST00000224111 2692 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 Mtfr1-203ENSMUST00000119865 1367 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC8.85□□□□□ -0.99
Hmgb1P63158 Gm9408-201ENSMUST00000197375 1505 ntBASIC8.85□□□□□ -0.99
Hmgb1P63158 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 A830010M20Rik-204ENSMUST00000112671 6756 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Hmgb1P63158 Adcy10-202ENSMUST00000111439 5193 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Rfx3-204ENSMUST00000172907 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Mybbp1a-201ENSMUST00000045633 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm45477-201ENSMUST00000200213 5498 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Pabpc4l-202ENSMUST00000192793 5252 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Dock5-201ENSMUST00000039135 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm13224-201ENSMUST00000119586 94 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm5255-201ENSMUST00000120125 642 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm12517-201ENSMUST00000122082 425 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm12223-201ENSMUST00000135468 528 ntTSL 3 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm17157-201ENSMUST00000172397 348 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Scgb1b21-202ENSMUST00000182901 278 ntTSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm9117-202ENSMUST00000193529 2325 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Wdr72-205ENSMUST00000215440 5160 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm9118-201ENSMUST00000219246 754 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Glrx-202ENSMUST00000220523 493 ntTSL 3 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC8.84□□□□□ -0.99
Hmgb1P63158 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 AC158142.3-201ENSMUST00000226230 675 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 AC167013.6-201ENSMUST00000226587 1067 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 AC154838.2-201ENSMUST00000226602 747 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 AC122774.1-201ENSMUST00000227703 762 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 CT009556.2-201ENSMUST00000227980 1123 ntBASIC8.84□□□□□ -0.99
Hmgb1P63158 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Olfr150-201ENSMUST00000078557 939 ntAPPRIS P1 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -0.99
Hmgb1P63158 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC8.84□□□□□ -0.99
Hmgb1P63158 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC8.84□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms