Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 AC163651.1-201ENSMUST00000222500 372 ntBASIC6.9□□□□□ -1.3
P20040 AC207128.2-202ENSMUST00000224010 808 ntBASIC6.9□□□□□ -1.3
P20040 CT009550.3-201ENSMUST00000228542 455 ntBASIC6.9□□□□□ -1.3
P20040 Parp9-201ENSMUST00000023622 2973 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Olfr503-201ENSMUST00000078162 972 ntAPPRIS P2 BASIC6.9□□□□□ -1.3
P20040 Gm15433-201ENSMUST00000097671 891 ntBASIC6.9□□□□□ -1.3
P20040 Gm38028-201ENSMUST00000193309 2169 ntTSL 5 BASIC6.9□□□□□ -1.3
P20040 Smad5-201ENSMUST00000069557 6584 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
P20040 Gm44898-201ENSMUST00000205934 2223 ntBASIC6.9□□□□□ -1.3
P20040 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.9□□□□□ -1.31
P20040 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC6.9□□□□□ -1.31
P20040 AC107757.2-201ENSMUST00000226370 1466 ntBASIC6.9□□□□□ -1.31
P20040 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.9□□□□□ -1.31
P20040 Cxcl5-201ENSMUST00000031318 1575 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.31
P20040 Gm42899-201ENSMUST00000197034 2667 ntBASIC6.9□□□□□ -1.31
P20040 Gm43161-201ENSMUST00000197020 1688 ntBASIC6.9□□□□□ -1.31
P20040 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
P20040 Olfr766-ps1-201ENSMUST00000204515 2909 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
P20040 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
P20040 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
P20040 Mapk10-203ENSMUST00000112847 7196 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Gm38209-201ENSMUST00000192711 2169 ntTSL 5 BASIC6.89□□□□□ -1.31
P20040 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC6.89□□□□□ -1.31
P20040 Gm5841-201ENSMUST00000195307 2177 ntBASIC6.89□□□□□ -1.31
P20040 Gm37263-201ENSMUST00000195837 2169 ntTSL 5 BASIC6.89□□□□□ -1.31
P20040 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.89□□□□□ -1.31
P20040 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 4930412C18Rik-202ENSMUST00000138390 3839 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Il1bos-202ENSMUST00000156601 2425 ntTSL 2 BASIC6.89□□□□□ -1.31
P20040 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
P20040 Gm22426-201ENSMUST00000103811 96 ntBASIC6.89□□□□□ -1.31
P20040 Ghrh-202ENSMUST00000109536 503 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Gm13325-201ENSMUST00000118746 806 ntBASIC6.89□□□□□ -1.31
P20040 Gm12773-201ENSMUST00000120134 587 ntBASIC6.89□□□□□ -1.31
P20040 Gm11901-201ENSMUST00000120412 437 ntBASIC6.89□□□□□ -1.31
P20040 Gm14414-201ENSMUST00000120833 573 ntBASIC6.89□□□□□ -1.31
P20040 Gm13466-201ENSMUST00000121515 999 ntBASIC6.89□□□□□ -1.31
P20040 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC6.89□□□□□ -1.31
P20040 Gm13017-201ENSMUST00000156409 400 ntTSL 3 BASIC6.89□□□□□ -1.31
P20040 Gm14214-201ENSMUST00000184654 678 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
P20040 Gm20587-201ENSMUST00000186367 1186 ntBASIC6.89□□□□□ -1.31
P20040 Gm29462-201ENSMUST00000191458 288 ntBASIC6.89□□□□□ -1.31
P20040 Gm35025-202ENSMUST00000193114 455 ntTSL 3 BASIC6.89□□□□□ -1.31
P20040 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC6.89□□□□□ -1.31
P20040 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.89□□□□□ -1.31
P20040 Gm9110-201ENSMUST00000219035 617 ntBASIC6.89□□□□□ -1.31
P20040 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC6.89□□□□□ -1.31
P20040 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
P20040 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Apoa2-201ENSMUST00000005824 492 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
P20040 Gm20302-201ENSMUST00000080671 275 ntBASIC6.89□□□□□ -1.31
P20040 Mir185-201ENSMUST00000083530 65 ntBASIC6.89□□□□□ -1.31
P20040 Gm10283-201ENSMUST00000093494 354 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
P20040 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC6.89□□□□□ -1.31
P20040 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
P20040 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Cphx2-201ENSMUST00000168149 1710 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Cphx3-202ENSMUST00000184577 1714 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Fasl-201ENSMUST00000000834 1937 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
P20040 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
P20040 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
P20040 Gm10419-204ENSMUST00000198585 4059 ntTSL 2 BASIC6.89□□□□□ -1.31
P20040 Clasp1-201ENSMUST00000049404 7797 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
P20040 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
P20040 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Gm28720-201ENSMUST00000190728 3156 ntBASIC6.88□□□□□ -1.31
P20040 Mtbp-204ENSMUST00000169667 2570 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 St7-206ENSMUST00000115417 2168 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Gm14373-201ENSMUST00000122467 2158 ntBASIC6.88□□□□□ -1.31
P20040 Gm44763-201ENSMUST00000208287 2019 ntBASIC6.88□□□□□ -1.31
P20040 Gm44187-201ENSMUST00000204735 1929 ntBASIC6.88□□□□□ -1.31
P20040 Clec1a-202ENSMUST00000203162 5128 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Psma8-201ENSMUST00000040860 1693 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Gm15572-201ENSMUST00000119248 593 ntBASIC6.88□□□□□ -1.31
P20040 Snhg12-203ENSMUST00000128131 614 ntTSL 2 BASIC6.88□□□□□ -1.31
P20040 Pla2g2a-203ENSMUST00000135748 788 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
P20040 Tmsb10-204ENSMUST00000144337 433 ntTSL 2 BASIC6.88□□□□□ -1.31
P20040 Pitpnm2os2-202ENSMUST00000162577 744 ntTSL 3 BASIC6.88□□□□□ -1.31
P20040 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC6.88□□□□□ -1.31
P20040 Mir6239-201ENSMUST00000183564 105 ntBASIC6.88□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms