Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm9423-201ENSMUST00000183173 997 ntBASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm29143-201ENSMUST00000189462 201 ntBASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm37294-201ENSMUST00000193461 494 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 AC132587.1-201ENSMUST00000220562 166 ntBASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 AC133598.3-204ENSMUST00000224260 767 ntBASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 AC154595.1-201ENSMUST00000225533 1059 ntBASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm10600-201ENSMUST00000117202 2047 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm42656-201ENSMUST00000201506 2305 ntBASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm4767-202ENSMUST00000188096 4725 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Slc6a5-203ENSMUST00000207753 6966 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm10556-201ENSMUST00000180904 3906 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 A830036E02Rik-202ENSMUST00000128904 2768 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Olfr743-202ENSMUST00000215793 2203 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Plb1-206ENSMUST00000202220 4771 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Tcf7l2-211ENSMUST00000111658 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Mgst1-202ENSMUST00000118091 1030 ntTSL 2 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Mgst1-203ENSMUST00000120230 1027 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 4930415H17Rik-201ENSMUST00000122396 123 ntBASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 H2-T24-202ENSMUST00000174063 884 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm8479-201ENSMUST00000203825 718 ntBASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Gm43904-201ENSMUST00000204945 379 ntTSL 5 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Olfr600-201ENSMUST00000056222 948 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Ccdc180J3QNE4 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 1700080N15Rik-202ENSMUST00000154360 1316 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Tcp10a-204ENSMUST00000138222 1838 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Acox3-210ENSMUST00000202266 3501 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Rhobtb1-201ENSMUST00000020101 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Gm37245-201ENSMUST00000195137 2713 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Gm10259-201ENSMUST00000091289 1590 ntBASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Nedd4l-204ENSMUST00000224347 3150 ntBASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Gm26719-201ENSMUST00000180395 3220 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Rest-201ENSMUST00000080359 7004 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 4930578G10Rik-202ENSMUST00000107984 762 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 C430002N11Rik-202ENSMUST00000189067 1029 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 1700066B17Rik-203ENSMUST00000191299 536 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Gm45045-201ENSMUST00000207368 218 ntTSL 5 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 AC123920.1-201ENSMUST00000221449 384 ntBASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 CT025630.2-201ENSMUST00000228293 487 ntBASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Pi4ka-211ENSMUST00000154364 6630 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Gm6502-201ENSMUST00000086050 1533 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Zfp758-204ENSMUST00000149699 2876 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Plxdc2-201ENSMUST00000028081 6947 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Ralgps1-204ENSMUST00000113165 6192 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Lpin2-204ENSMUST00000129635 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Btbd11-202ENSMUST00000105306 3945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Ccdc180J3QNE4 Srrm1-201ENSMUST00000030613 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc180J3QNE4 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc180J3QNE4 Erbb4-202ENSMUST00000121473 12037 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc180J3QNE4 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC14.02□□□□□ -0.16
Ccdc180J3QNE4 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Ccdc180J3QNE4 AC163621.1-201ENSMUST00000220695 379 ntBASIC14.02□□□□□ -0.16
Ccdc180J3QNE4 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC14.02□□□□□ -0.16
Ccdc180J3QNE4 AC110176.1-201ENSMUST00000226219 504 ntBASIC14.02□□□□□ -0.16
Ccdc180J3QNE4 AI506816-205ENSMUST00000199941 2804 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc180J3QNE4 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc180J3QNE4 Gm37520-201ENSMUST00000194883 2672 ntBASIC14.02□□□□□ -0.17
Ccdc180J3QNE4 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc180J3QNE4 Rgn-201ENSMUST00000023832 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc180J3QNE4 Aff1-201ENSMUST00000031256 8312 ntAPPRIS P4 TSL 5 BASIC14.02□□□□□ -0.17
Ccdc180J3QNE4 Hmgxb4-202ENSMUST00000109940 2656 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Ccdc180J3QNE4 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Olfr1410-202ENSMUST00000216553 5433 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Gm43336-201ENSMUST00000200487 4504 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Synj2-209ENSMUST00000115790 4808 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Gm25344-201ENSMUST00000104503 132 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Npm1-204ENSMUST00000109354 1157 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Gm12477-201ENSMUST00000121221 571 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Gm24893-201ENSMUST00000122745 369 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Gm9118-201ENSMUST00000219246 754 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Gm22504-201ENSMUST00000082963 139 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Dclre1b-202ENSMUST00000063502 4113 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Baz2a-203ENSMUST00000217851 8385 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Espl1-201ENSMUST00000064924 6630 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 4930551L18Rik-201ENSMUST00000156086 700 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Mir6908-201ENSMUST00000184056 63 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Mir6357-201ENSMUST00000184246 104 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 4933431C10Rik-201ENSMUST00000208973 1266 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Gm18655-201ENSMUST00000214802 1090 ntBASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Clec4a2-201ENSMUST00000032248 1261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Ccdc180J3QNE4 Gm973-201ENSMUST00000114243 3595 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Ccdc180J3QNE4 Gm37447-201ENSMUST00000195625 2928 ntBASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms