Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Gm18839-201ENSMUST00000204292 670 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm45008-201ENSMUST00000206420 493 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm44690-201ENSMUST00000207984 382 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm17911-201ENSMUST00000210806 877 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 AC123069.1-201ENSMUST00000215094 824 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 BC042761-201ENSMUST00000218344 938 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Mfap5-201ENSMUST00000032210 946 ntTSL 3 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Ctsj-201ENSMUST00000071526 1271 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Bank1-203ENSMUST00000196159 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 B430010I23Rik-201ENSMUST00000123703 2349 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Sec23a-204ENSMUST00000165134 2529 ntTSL 5 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 C9-201ENSMUST00000022749 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Mill2-206ENSMUST00000228493 2043 ntAPPRIS P4 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Cdh26-202ENSMUST00000108912 2908 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 2210408I21Rik-202ENSMUST00000225605 1539 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Phldb2-202ENSMUST00000076333 5347 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gja1-206ENSMUST00000220069 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gpnmb-201ENSMUST00000031840 3701 ntAPPRIS P2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm20539-201ENSMUST00000174811 1384 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Snx31-201ENSMUST00000013755 2696 ntAPPRIS P3 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Them7-201ENSMUST00000068813 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Ubap2l-220ENSMUST00000199834 3494 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Tmem19-209ENSMUST00000219890 2949 ntTSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm27013-202ENSMUST00000205067 1436 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Sall1-201ENSMUST00000034090 5265 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Olfr1357-201ENSMUST00000095473 1826 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Acad11-207ENSMUST00000189998 2030 ntTSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Akap10-201ENSMUST00000058173 2015 ntTSL 2 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Synj2-208ENSMUST00000115789 5130 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm45292-201ENSMUST00000211232 2207 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Ighv1-82-201ENSMUST00000103549 294 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm15009-201ENSMUST00000121387 322 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm26048-201ENSMUST00000157305 142 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm24211-201ENSMUST00000158264 107 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm5205-201ENSMUST00000182253 1003 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm26929-201ENSMUST00000182703 753 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Ighv5-21-201ENSMUST00000191935 295 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm38051-201ENSMUST00000193740 433 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm44946-201ENSMUST00000208425 572 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm7240-201ENSMUST00000220769 664 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 AC142227.1-201ENSMUST00000221371 621 ntTSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 AC164116.2-201ENSMUST00000225398 1038 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 AC107663.2-201ENSMUST00000225534 1234 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 AC144628.1-201ENSMUST00000227943 466 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Clec2d-201ENSMUST00000032260 1213 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Cutal-202ENSMUST00000047447 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Fbxw13-201ENSMUST00000061456 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 AC160118.1-201ENSMUST00000214497 2457 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Sptbn1-201ENSMUST00000006629 8461 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Mep1a-201ENSMUST00000024707 2921 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gbp9-202ENSMUST00000100961 2701 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 4930470B04Rik-201ENSMUST00000192005 1926 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 4933403O08Rik-202ENSMUST00000152343 1520 ntAPPRIS P2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Xntrpc-201ENSMUST00000084843 4173 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gpatch2-206ENSMUST00000160471 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm6614-201ENSMUST00000111832 1953 ntAPPRIS P2 TSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Srpx2-202ENSMUST00000113304 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Slc18b1-201ENSMUST00000119597 2837 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm43465-201ENSMUST00000200367 2802 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm42759-201ENSMUST00000195915 2439 ntBASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Serpina3i-201ENSMUST00000109958 2200 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
Ube3bQ9ES34 Gm37699-201ENSMUST00000194753 3338 ntBASIC10□□□□□ -0.81
Ube3bQ9ES34 Mss51-201ENSMUST00000022353 1826 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Myo15-201ENSMUST00000071880 11769 ntAPPRIS P4 TSL 5 BASIC10□□□□□ -0.81
Ube3bQ9ES34 Pkp4-203ENSMUST00000112577 4222 ntTSL 5 BASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm6418-201ENSMUST00000118325 3577 ntBASIC10□□□□□ -0.81
Ube3bQ9ES34 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC10□□□□□ -0.81
Ube3bQ9ES34 Nt5dc1-201ENSMUST00000047885 2743 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Dcdc2c-204ENSMUST00000189735 1434 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Cdk15-202ENSMUST00000160662 2108 ntAPPRIS ALT2 TSL 5 BASIC10□□□□□ -0.81
Ube3bQ9ES34 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Olfr237-ps1-202ENSMUST00000215911 4220 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Ube3bQ9ES34 Fbxo16-203ENSMUST00000224629 3781 ntAPPRIS P2 BASIC10□□□□□ -0.81
Ube3bQ9ES34 Supt20-211ENSMUST00000200441 2154 ntTSL 5 BASIC10□□□□□ -0.81
Ube3bQ9ES34 Ccdc47-201ENSMUST00000002043 5193 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Lrrc69-202ENSMUST00000108276 1210 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Cdk2ap1-203ENSMUST00000111473 715 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm14131-201ENSMUST00000119636 719 ntBASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm12577-201ENSMUST00000119701 574 ntBASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm12287-201ENSMUST00000119770 707 ntBASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm14623-201ENSMUST00000121398 603 ntBASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm13776-201ENSMUST00000122236 1261 ntBASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm12925-201ENSMUST00000130791 678 ntTSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm12911-201ENSMUST00000140639 703 ntTSL 3 BASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm4907-202ENSMUST00000163718 1236 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Ube3bQ9ES34 Gm8669-201ENSMUST00000183839 945 ntBASIC10□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 117.9 ms