Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm28070-201ENSMUST00000191502 445 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm34583-203ENSMUST00000202586 454 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Adra1a-201ENSMUST00000054661 4137 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Sestd1-201ENSMUST00000102659 2720 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm18262-201ENSMUST00000222560 1946 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Fam107a-201ENSMUST00000036070 3151 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Erc1-203ENSMUST00000183703 8760 ntAPPRIS P2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm7134-201ENSMUST00000122296 2406 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm42700-201ENSMUST00000199071 2437 ntBASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Gm4894-202ENSMUST00000216428 2294 ntAPPRIS P1 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 Txnip-202ENSMUST00000074519 2827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.58□□□□□ -1.2
Cdh23Q99PF4 n-R5s178-201ENSMUST00000104249 114 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm15047-201ENSMUST00000118891 454 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm13252-201ENSMUST00000119355 321 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm16095-201ENSMUST00000128235 253 ntTSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 AC166358.9-201ENSMUST00000220653 375 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 AV026068-219ENSMUST00000224148 933 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm42744-201ENSMUST00000196517 2147 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm42678-201ENSMUST00000197163 2221 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Inpp5d-209ENSMUST00000168783 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Cul4b-202ENSMUST00000050083 3090 ntAPPRIS P2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Mir466j-201ENSMUST00000116876 122 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm29066-201ENSMUST00000188502 452 ntTSL 3 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm44411-201ENSMUST00000204172 349 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm20063-201ENSMUST00000220757 1089 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 AC153793.1-201ENSMUST00000220956 1298 ntTSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm5528-201ENSMUST00000076314 480 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm29077-201ENSMUST00000185784 2169 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm28696-201ENSMUST00000189187 2169 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm28206-201ENSMUST00000190437 2169 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm28593-201ENSMUST00000190989 2170 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm37657-201ENSMUST00000195425 2169 ntTSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Erp44-201ENSMUST00000030028 2624 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Prom1-202ENSMUST00000074113 3966 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm16179-201ENSMUST00000120685 373 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm36961-201ENSMUST00000191980 132 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 CT025598.1-201ENSMUST00000225140 427 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 F630040K05Rik-201ENSMUST00000180519 2841 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Ppp3cc-203ENSMUST00000228911 1836 ntAPPRIS ALT2 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm43789-201ENSMUST00000199275 2472 ntBASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Hmgn5-201ENSMUST00000033597 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Pus3-202ENSMUST00000121246 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Gm4884-201ENSMUST00000164422 2852 ntAPPRIS P1 TSL 2 BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Sdr42e1-201ENSMUST00000037955 2867 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Cdh23Q99PF4 Ston1-205ENSMUST00000150023 3231 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm22256-201ENSMUST00000102291 107 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm13229-201ENSMUST00000118238 340 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm23533-201ENSMUST00000157540 245 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm26211-201ENSMUST00000158578 129 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm27854-201ENSMUST00000175578 244 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 1700108F19Rik-207ENSMUST00000191384 210 ntTSL 3 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm46124-202ENSMUST00000217260 860 ntTSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Olfr312-201ENSMUST00000078217 927 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Star-201ENSMUST00000033979 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm29811-201ENSMUST00000197386 1671 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Ston1-201ENSMUST00000064035 3287 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Slc4a4-208ENSMUST00000156238 3494 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Bbs9-211ENSMUST00000150395 3425 ntAPPRIS P2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm45873-201ENSMUST00000211865 1915 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Atp1a4-201ENSMUST00000111243 3470 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gm7265-201ENSMUST00000192735 3502 ntBASIC7.56□□□□□ -1.2
Cdh23Q99PF4 Gapt-201ENSMUST00000058806 2069 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms