Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Rpgrip1-201ENSMUST00000111600 4565 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Siglech-202ENSMUST00000094360 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Anpep-201ENSMUST00000049004 3422 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Ubn2-205ENSMUST00000160583 14644 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Nsd3-201ENSMUST00000084026 9945 ntAPPRIS P2 TSL 2 BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Arpp21-230ENSMUST00000172380 3366 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Cep162-201ENSMUST00000093802 7685 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Cdh13-201ENSMUST00000117160 3785 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
RtcbQ99LF4 Clasp2-202ENSMUST00000163895 4112 ntAPPRIS ALT2 TSL 5 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Tyrp1-202ENSMUST00000102831 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Epn2-201ENSMUST00000001063 4243 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Fam161b-201ENSMUST00000021659 3357 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Hist1h1d-201ENSMUST00000045301 7425 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 BC026762-201ENSMUST00000206555 2503 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Tmem63c-202ENSMUST00000131878 3311 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Harbi1-205ENSMUST00000142692 3686 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Phactr4-203ENSMUST00000102568 4614 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm24195-201ENSMUST00000116804 137 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm13521-201ENSMUST00000118922 866 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm10230-201ENSMUST00000119362 867 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm12105-201ENSMUST00000120846 779 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm12535-201ENSMUST00000121025 484 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm27026-201ENSMUST00000183003 892 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm27458-201ENSMUST00000185108 121 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Oaz3-207ENSMUST00000204913 689 ntTSL 5 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Olfr1468-ps1-201ENSMUST00000207287 1208 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 AC140451.1-201ENSMUST00000227984 737 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Olfr829-201ENSMUST00000058411 966 ntAPPRIS P2 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm25926-201ENSMUST00000082899 160 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Aoc1-203ENSMUST00000162948 2831 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Nln-201ENSMUST00000109315 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm38359-201ENSMUST00000191884 2225 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm45769-201ENSMUST00000204588 1828 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Cul2-201ENSMUST00000025073 3727 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 D130017N08Rik-202ENSMUST00000180951 2573 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gphn-202ENSMUST00000110388 3300 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Dhx30-204ENSMUST00000196171 3885 ntTSL 5 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm10101-202ENSMUST00000181311 2919 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Magi2-215ENSMUST00000208219 3266 ntTSL 5 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm19409-201ENSMUST00000198244 2858 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Zfp207-202ENSMUST00000053740 1562 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Cep41-201ENSMUST00000031810 3447 ntAPPRIS P2 TSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm38383-201ENSMUST00000194131 2660 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Gm37673-201ENSMUST00000194880 2451 ntBASIC9.88□□□□□ -0.83
RtcbQ99LF4 Arhgef3-201ENSMUST00000049206 3585 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
RtcbQ99LF4 9530053A07Rik-201ENSMUST00000059886 7922 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
RtcbQ99LF4 Spag9-205ENSMUST00000103168 6840 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm29507-201ENSMUST00000187378 2088 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm37699-201ENSMUST00000194753 3338 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Creb1-202ENSMUST00000087366 8364 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 4931431C16Rik-201ENSMUST00000124643 2735 ntTSL 2 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm28670-201ENSMUST00000185365 1498 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm29537-202ENSMUST00000186153 1498 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm29497-201ENSMUST00000186801 1498 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm28568-201ENSMUST00000187762 1498 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm29445-202ENSMUST00000189947 1497 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm28458-202ENSMUST00000190542 1497 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm28457-202ENSMUST00000191277 1498 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm37654-201ENSMUST00000193019 1498 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Clip4-201ENSMUST00000024854 4055 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Lama1-201ENSMUST00000035471 9518 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm16233-201ENSMUST00000136170 1623 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm11189-201ENSMUST00000117979 375 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm14833-201ENSMUST00000118345 1027 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm14908-201ENSMUST00000120930 1286 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Tsc22d1-205ENSMUST00000133224 786 ntTSL 2 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm12236-201ENSMUST00000152968 250 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm6542-201ENSMUST00000153606 772 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm10012-202ENSMUST00000170379 372 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 4833412C05Rik-201ENSMUST00000181235 1083 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm28835-201ENSMUST00000188415 655 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm44508-201ENSMUST00000206943 1157 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm7972-201ENSMUST00000208434 1137 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm7394-201ENSMUST00000209138 1032 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm19095-201ENSMUST00000220533 730 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm272-201ENSMUST00000222073 919 ntBASIC9.87□□□□□ -0.83
RtcbQ99LF4 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 94 ms