Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Gm36816-201ENSMUST00000204824 493 ntTSL 3 BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Gm45900-201ENSMUST00000211879 409 ntBASIC9.04□□□□□ -0.96
Alx1Q8C8B0 AC162183.1-201ENSMUST00000224843 472 ntBASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Gm6054-201ENSMUST00000078052 378 ntBASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Cbx3-ps7-201ENSMUST00000081455 552 ntBASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Vmn1r196-201ENSMUST00000091735 906 ntAPPRIS P2 BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Gm17199-201ENSMUST00000097296 416 ntBASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Gm10778-202ENSMUST00000189672 4735 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 4930528G23Rik-201ENSMUST00000124575 1723 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Gm37995-201ENSMUST00000194958 1714 ntBASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Hmgxb4-201ENSMUST00000041759 4191 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Efr3a-213ENSMUST00000211878 2541 ntTSL 5 BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Stxbp5-202ENSMUST00000125200 3300 ntTSL 5 BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Sh2d2a-201ENSMUST00000029709 4484 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Gm43519-201ENSMUST00000197239 1872 ntBASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Gm6117-201ENSMUST00000150540 1333 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 Ncoa7-209ENSMUST00000216172 2026 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Alx1Q8C8B0 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm37109-201ENSMUST00000195475 2254 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm10637-202ENSMUST00000184702 3233 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 AC107757.2-201ENSMUST00000226370 1466 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Lipt1-201ENSMUST00000041621 1485 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Galnt11-203ENSMUST00000114952 2449 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm14244-201ENSMUST00000155688 2410 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm16025-202ENSMUST00000161923 2425 ntTSL 2 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm43776-201ENSMUST00000199729 2914 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm232-201ENSMUST00000216549 2559 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm5118-201ENSMUST00000184692 2203 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Pvt1-202ENSMUST00000181416 3319 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Eif2s3x-202ENSMUST00000113922 1103 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm11188-201ENSMUST00000122382 388 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm14329-201ENSMUST00000136027 591 ntTSL 3 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm16143-201ENSMUST00000155982 538 ntTSL 5 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Mir1983-201ENSMUST00000157523 132 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm18709-201ENSMUST00000180564 489 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm27458-201ENSMUST00000185108 121 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm28535-201ENSMUST00000188069 885 ntTSL 3 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm29355-201ENSMUST00000188178 697 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm28953-201ENSMUST00000188336 697 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm20788-201ENSMUST00000190538 697 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm37395-201ENSMUST00000194721 697 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm37481-201ENSMUST00000195176 403 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm37440-202ENSMUST00000195572 1227 ntTSL 5 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm43590-201ENSMUST00000195987 387 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm42558-201ENSMUST00000200982 265 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 AC134414.1-201ENSMUST00000228499 1221 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Olfr676-201ENSMUST00000098162 954 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm14226-201ENSMUST00000130870 3243 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm21043-201ENSMUST00000199316 1517 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 1110008L16Rik-201ENSMUST00000021411 3122 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 A130012E19Rik-201ENSMUST00000218674 3135 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 CT010505.3-201ENSMUST00000227835 1651 ntBASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Ndp-201ENSMUST00000040134 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Ccdc187-203ENSMUST00000227200 9528 ntAPPRIS ALT2 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Cd163-202ENSMUST00000112541 4443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Nrxn3-210ENSMUST00000167887 3303 ntTSL 5 BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Tpx2-202ENSMUST00000109816 3483 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Fam216b-201ENSMUST00000066437 2241 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Alx1Q8C8B0 Mme-201ENSMUST00000029400 3782 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Med1-201ENSMUST00000018304 5845 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Adamts3-202ENSMUST00000163159 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Adamts3-201ENSMUST00000061427 3934 ntAPPRIS P3 TSL 1 (best) BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Rad54l-201ENSMUST00000102704 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Sorbs1-211ENSMUST00000224667 4313 ntAPPRIS ALT2 BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Ctnnd1-222ENSMUST00000111696 6281 ntTSL 5 BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Tcp10c-201ENSMUST00000097403 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Gm38099-201ENSMUST00000193280 3170 ntBASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Chek2-201ENSMUST00000066160 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
Alx1Q8C8B0 Fnbp1-207ENSMUST00000113559 4378 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Zscan4b-202ENSMUST00000210847 1779 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Siae-202ENSMUST00000213126 2306 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Gm28403-201ENSMUST00000188743 2710 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Etl4-204ENSMUST00000114606 5284 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Sorbs2-222ENSMUST00000141039 1699 ntTSL 5 BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Lrrc51-206ENSMUST00000106966 821 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Gm13521-201ENSMUST00000118922 866 ntBASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Gm15763-201ENSMUST00000120136 403 ntBASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Gm12632-201ENSMUST00000121223 495 ntBASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Gm25164-201ENSMUST00000158908 116 ntBASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Zwint-204ENSMUST00000160337 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Lrmda-206ENSMUST00000162540 742 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Alx1Q8C8B0 Vmn1r-ps18-201ENSMUST00000176901 876 ntBASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 53.3 ms