Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Alb-201ENSMUST00000031314 2034 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Olfr628-201ENSMUST00000098193 1553 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm34184-201ENSMUST00000216477 2713 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Robo2-201ENSMUST00000116586 4764 ntTSL 5 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Slco1a4-201ENSMUST00000032364 2252 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Plce1-201ENSMUST00000169713 9439 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Olfr1513-202ENSMUST00000215147 2873 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Ifna13-201ENSMUST00000105149 819 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Olfr271-ps1-201ENSMUST00000121614 952 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 1700021N21Rik-201ENSMUST00000131110 904 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 1700028P15Rik-202ENSMUST00000139894 856 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 BC048671-202ENSMUST00000167550 890 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Olfr270-202ENSMUST00000172257 939 ntAPPRIS P2 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm22347-201ENSMUST00000180276 132 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm7863-201ENSMUST00000184700 805 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm43377-201ENSMUST00000201640 455 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm34358-201ENSMUST00000204585 665 ntTSL 3 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm45014-201ENSMUST00000207657 405 ntTSL 3 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Olfr271-ps1-202ENSMUST00000217546 852 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm22054-201ENSMUST00000083395 155 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm23037-201ENSMUST00000083874 324 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Olfr1179-201ENSMUST00000099825 924 ntAPPRIS P1 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Hdac9-203ENSMUST00000209667 1635 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 CT009480.2-201ENSMUST00000225152 3369 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Olfr1555-ps1-202ENSMUST00000219261 2918 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 AC161117.1-201ENSMUST00000221366 1529 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Dst-209ENSMUST00000182697 2704 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Cd200r4-202ENSMUST00000176321 2005 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm9877-201ENSMUST00000064271 2627 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Ssr1-201ENSMUST00000021864 9333 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 3830408C21Rik-202ENSMUST00000223895 1689 ntBASIC8.27□□□□□ -1.09
CtifQ6PEE2 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CtifQ6PEE2 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 1110019D14Rik-202ENSMUST00000181225 1499 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm43750-201ENSMUST00000199027 2493 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm7842-201ENSMUST00000217691 1379 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Ciart-201ENSMUST00000036418 1398 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm28068-201ENSMUST00000190861 3503 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Cyp2j7-201ENSMUST00000162514 1515 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm23659-201ENSMUST00000102245 110 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Ighv1-9-201ENSMUST00000103498 348 ntAPPRIS ALT2 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Ccdc141-203ENSMUST00000111833 631 ntTSL 2 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Parp11-204ENSMUST00000112195 733 ntTSL 3 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm11875-201ENSMUST00000118187 799 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm12955-201ENSMUST00000119689 957 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm11480-201ENSMUST00000120214 659 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm14048-201ENSMUST00000121864 1268 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Il1rn-205ENSMUST00000142093 321 ntTSL 3 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 4931406B18Rik-202ENSMUST00000163474 726 ntTSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Tecr-202ENSMUST00000163837 1272 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 H2-Aa-204ENSMUST00000174751 826 ntTSL 3 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm8696-201ENSMUST00000174777 385 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm28941-201ENSMUST00000185536 1017 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm37247-201ENSMUST00000192549 730 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm23377-202ENSMUST00000196828 138 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm43287-201ENSMUST00000197747 600 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm30694-201ENSMUST00000209278 1230 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm36843-201ENSMUST00000209303 627 ntTSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 AC139579.1-201ENSMUST00000214560 606 ntTSL 3 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 AC132247.1-201ENSMUST00000225930 585 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm15433-201ENSMUST00000097671 891 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm4806-201ENSMUST00000222704 1690 ntBASIC8.26□□□□□ -1.09
CtifQ6PEE2 Tnik-215ENSMUST00000162777 3894 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Nfat5-214ENSMUST00000169453 13380 ntAPPRIS P3 TSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 1110008L16Rik-202ENSMUST00000183475 2204 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Glce-203ENSMUST00000185675 4850 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CtifQ6PEE2 Itgb3bp-204ENSMUST00000146258 2806 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CtifQ6PEE2 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.25□□□□□ -1.09
CtifQ6PEE2 Vmn2r88-201ENSMUST00000022438 2574 ntAPPRIS P2 TSL 5 BASIC8.25□□□□□ -1.09
CtifQ6PEE2 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CtifQ6PEE2 D330041H03Rik-207ENSMUST00000181760 1362 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
CtifQ6PEE2 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
CtifQ6PEE2 Klrb1c-201ENSMUST00000167691 2623 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
CtifQ6PEE2 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
CtifQ6PEE2 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
CtifQ6PEE2 Iars-202ENSMUST00000164260 3789 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms