Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 4930480K23Rik-201ENSMUST00000180465 3326 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm43409-201ENSMUST00000195921 2162 ntTSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Slco2b1-202ENSMUST00000107086 3993 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Abcc12-203ENSMUST00000131423 4893 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 AC121942.3-201ENSMUST00000225768 1436 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Cyfip1-203ENSMUST00000163845 4178 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Abraxas2-201ENSMUST00000084497 2892 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Pde10a-204ENSMUST00000115715 2783 ntAPPRIS ALT2 TSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 AC112680.1-201ENSMUST00000215435 1349 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Ugt2b34-201ENSMUST00000031181 3051 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Lilra6-204ENSMUST00000206077 2281 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
Trim43aQ3TL54 Gm1982-201ENSMUST00000188615 1887 ntBASIC8.26□□□□□ -1.09
Trim43aQ3TL54 AI182371-207ENSMUST00000226972 1642 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Smg1-201ENSMUST00000032891 15557 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Olfr45-202ENSMUST00000214637 6157 ntAPPRIS P1 TSL 3 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm44187-201ENSMUST00000204735 1929 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Cyp24a1-201ENSMUST00000038824 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Sla-201ENSMUST00000100572 2626 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Pum1-203ENSMUST00000097864 4017 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Zbbx-201ENSMUST00000039269 2399 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Nwd1-204ENSMUST00000161254 10792 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Zfp59-201ENSMUST00000108331 1962 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm23192-201ENSMUST00000102434 96 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 A530010F05Rik-201ENSMUST00000146845 1020 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 1700071M16Rik-202ENSMUST00000167672 767 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm17157-201ENSMUST00000172397 348 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm6004-201ENSMUST00000173237 1116 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm25082-201ENSMUST00000177296 255 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm20834-202ENSMUST00000185576 1220 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm29491-201ENSMUST00000189481 506 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm44451-201ENSMUST00000203767 483 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm6312-201ENSMUST00000204060 1194 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Cyb5r2-202ENSMUST00000208217 1178 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm45889-201ENSMUST00000209535 1057 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 AC107663.2-201ENSMUST00000225534 1234 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Ndufa4-201ENSMUST00000031637 468 ntTSL 3 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Mup2-201ENSMUST00000074700 927 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Mup7-201ENSMUST00000079697 927 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Mup19-201ENSMUST00000080606 927 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Cst7-201ENSMUST00000089200 986 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Cd84-203ENSMUST00000135386 3434 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Schip1-207ENSMUST00000182997 1557 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Jcad-201ENSMUST00000037029 6730 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Grik1-209ENSMUST00000227986 2942 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Msn-201ENSMUST00000117399 3842 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm11961-201ENSMUST00000135775 1319 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Abcc9-202ENSMUST00000087527 6213 ntAPPRIS P5 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Gm44898-201ENSMUST00000205934 2223 ntBASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Trim43aQ3TL54 Enox2-204ENSMUST00000114914 3936 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Sept11-203ENSMUST00000201421 2428 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 3110099E03Rik-203ENSMUST00000143695 1353 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm44834-201ENSMUST00000206671 1396 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 5330413P13Rik-203ENSMUST00000150466 2173 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Pdgfd-201ENSMUST00000058692 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Slc25a53-202ENSMUST00000113069 3189 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm25501-201ENSMUST00000104429 132 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm11207-201ENSMUST00000117824 414 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm15355-201ENSMUST00000118929 285 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm12170-201ENSMUST00000119281 300 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Olfr268-ps1-201ENSMUST00000121395 945 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm22949-201ENSMUST00000158562 105 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm4252-201ENSMUST00000174823 313 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Mir6930-201ENSMUST00000183859 68 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm36961-201ENSMUST00000191980 132 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm6394-201ENSMUST00000197077 477 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Gm45454-201ENSMUST00000211484 455 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Olfr1065-203ENSMUST00000216165 992 ntAPPRIS P1 BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 AC158239.1-201ENSMUST00000216890 779 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 CT010462.1-201ENSMUST00000220554 1200 ntTSL 5 BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 CT033774.2-201ENSMUST00000222079 256 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 AC123058.1-201ENSMUST00000223748 437 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 AC165155.1-201ENSMUST00000228932 445 ntBASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Apoc2-201ENSMUST00000003074 631 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC8.24□□□□□ -1.09
Trim43aQ3TL54 Dclk1-208ENSMUST00000198437 4315 ntTSL 1 (best) BASIC8.24□□□□□ -1.09
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms