Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx4Q07424 Gm16153-201ENSMUST00000132184 4118 ntTSL 5 BASIC6.19□□□□□ -1.42
Cdx4Q07424 Pgbd1-205ENSMUST00000151743 2642 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx4Q07424 Pign-210ENSMUST00000190811 3015 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx4Q07424 Glrb-206ENSMUST00000194085 1341 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx4Q07424 Olfr324-202ENSMUST00000214990 3624 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Cdx4Q07424 Hnrnpk-205ENSMUST00000176207 2653 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx4Q07424 Zscan21-205ENSMUST00000110961 2310 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx4Q07424 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cdx4Q07424 Serpina1a-202ENSMUST00000085056 1360 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Trip4-210ENSMUST00000179395 7055 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Srgap1-201ENSMUST00000020322 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Smim17-202ENSMUST00000160218 3197 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Tnik-205ENSMUST00000160307 4404 ntAPPRIS P4 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Tnni3k-201ENSMUST00000064076 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 AC124572.1-201ENSMUST00000218155 2406 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Cnot2-209ENSMUST00000167706 1621 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Usp15-201ENSMUST00000020334 4666 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gsdmc3-201ENSMUST00000089894 1443 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Acvr1-202ENSMUST00000090935 3293 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Nek7-203ENSMUST00000187407 4336 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Tmem209-203ENSMUST00000115157 2273 ntAPPRIS ALT1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Drp2-204ENSMUST00000113228 3141 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Rars2-201ENSMUST00000029968 1868 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gulp1-201ENSMUST00000074525 3138 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Pnp-203ENSMUST00000048615 2942 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 AC160340.1-201ENSMUST00000222952 3964 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Spp1-205ENSMUST00000112748 1456 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Mir669o-201ENSMUST00000103898 96 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm11220-201ENSMUST00000118844 475 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm15753-201ENSMUST00000119241 1062 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm12297-201ENSMUST00000121380 979 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm26048-201ENSMUST00000157305 142 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm24004-201ENSMUST00000158460 178 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm25265-201ENSMUST00000158520 347 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28041-201ENSMUST00000166080 779 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm17258-201ENSMUST00000168462 1266 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28421-201ENSMUST00000186378 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28355-201ENSMUST00000187443 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm34217-201ENSMUST00000193562 356 ntTSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm19030-201ENSMUST00000194947 552 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm37676-201ENSMUST00000195496 507 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm42538-201ENSMUST00000196233 566 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm43568-202ENSMUST00000198427 476 ntTSL 3 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm42745-201ENSMUST00000200904 193 ntTSL 3 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm18402-201ENSMUST00000203834 586 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 4930595O18Rik-201ENSMUST00000205099 607 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm45356-201ENSMUST00000209274 823 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm45399-201ENSMUST00000209955 1016 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm45674-201ENSMUST00000210043 450 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm45712-201ENSMUST00000212417 335 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm8767-201ENSMUST00000215786 1070 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Gm4120-201ENSMUST00000220456 578 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 AC165254.1-203ENSMUST00000222925 574 ntTSL 3 BASIC6.18□□□□□ -1.42
Cdx4Q07424 AC163041.2-201ENSMUST00000223082 573 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Tctex1d1-208ENSMUST00000223169 683 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cdx4Q07424 AC123058.1-201ENSMUST00000223748 437 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 AC096628.1-201ENSMUST00000226060 641 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 AC140368.1-202ENSMUST00000226131 658 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 AC116487.1-201ENSMUST00000227033 339 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Slitrk2-201ENSMUST00000036043 2992 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Ndufa7-201ENSMUST00000048249 508 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Olfr1388-201ENSMUST00000055584 936 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Olfr298-201ENSMUST00000077800 999 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cdx4Q07424 Mir30c-1-201ENSMUST00000083556 89 ntBASIC6.18□□□□□ -1.42
Cdx4Q07424 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Tmem35a-201ENSMUST00000037687 1918 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cdx4Q07424 Ocln-202ENSMUST00000069756 4052 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 72.3 ms