Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm27185-201ENSMUST00000184296 247 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm7891-201ENSMUST00000190284 843 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm36974-201ENSMUST00000194200 1071 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm37072-201ENSMUST00000194570 837 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm36932-201ENSMUST00000195226 929 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Prkar2a-206ENSMUST00000195405 1143 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 4933438B17Rik-201ENSMUST00000196336 1169 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm2691-201ENSMUST00000203205 901 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm44137-201ENSMUST00000203670 367 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm6749-201ENSMUST00000203838 405 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm16571-202ENSMUST00000203839 585 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm43946-201ENSMUST00000204058 886 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm44712-201ENSMUST00000206250 1076 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm7443-201ENSMUST00000206355 378 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC7.02□□□□□ -1.29
Col8a1Q00780 AC154307.1-201ENSMUST00000214799 90 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm19174-201ENSMUST00000216944 956 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 AC160114.2-201ENSMUST00000223021 300 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 AC122533.2-201ENSMUST00000223772 545 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 AC165154.2-201ENSMUST00000227310 336 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 CT030238.2-201ENSMUST00000227382 1278 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 AC107711.5-201ENSMUST00000228149 594 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Pcp4-201ENSMUST00000061739 641 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Olfr90-201ENSMUST00000070808 1046 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm10145-201ENSMUST00000077776 462 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Tac1-201ENSMUST00000090679 980 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm10705-201ENSMUST00000098980 461 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm17167-201ENSMUST00000169242 5054 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm36949-201ENSMUST00000192487 2327 ntBASIC7.02□□□□□ -1.29
Col8a1Q00780 Cmah-201ENSMUST00000050859 2444 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Zfp658-202ENSMUST00000107972 3495 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Ece2-207ENSMUST00000079600 3349 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Prkar1a-203ENSMUST00000106677 3513 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Acbd5-201ENSMUST00000028121 3630 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Dhx30-202ENSMUST00000111991 3829 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC7.02□□□□□ -1.29
Col8a1Q00780 Bbs9-201ENSMUST00000039798 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Gm15728-201ENSMUST00000140833 3492 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Ctcflos-204ENSMUST00000153523 3476 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Isy1-201ENSMUST00000089497 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Col8a1Q00780 Serpinb6a-202ENSMUST00000043552 1547 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Cnot2-209ENSMUST00000167706 1621 ntTSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm26562-201ENSMUST00000181113 2010 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Prcp-202ENSMUST00000207594 2245 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm37957-201ENSMUST00000192182 2303 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Cntn4-205ENSMUST00000113261 2904 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm38236-201ENSMUST00000192661 3229 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Cd22-203ENSMUST00000186154 3819 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Krba1-204ENSMUST00000114572 4323 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Eya3-203ENSMUST00000081726 5160 ntAPPRIS P4 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 AC160562.1-201ENSMUST00000216170 3468 ntTSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm37818-201ENSMUST00000194952 3169 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Cfb-206ENSMUST00000154526 2397 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Asph-206ENSMUST00000103004 1762 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm3138-201ENSMUST00000165431 1760 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Npy2r-204ENSMUST00000182831 1689 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm43771-201ENSMUST00000202931 1578 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm42852-201ENSMUST00000202649 1379 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Tsacc-201ENSMUST00000010682 481 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm14550-201ENSMUST00000117918 407 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm8688-201ENSMUST00000118240 969 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm15568-201ENSMUST00000118589 1213 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm13506-201ENSMUST00000120391 1083 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm11383-201ENSMUST00000121346 807 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm16284-201ENSMUST00000140995 400 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm16102-201ENSMUST00000160955 420 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm16297-201ENSMUST00000161466 459 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Rpain-210ENSMUST00000167509 519 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Slc35a5-205ENSMUST00000181177 865 ntTSL 3 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm26851-201ENSMUST00000181867 918 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Mir6769b-201ENSMUST00000184793 60 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm28239-201ENSMUST00000190225 447 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm8521-201ENSMUST00000190394 606 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm38177-201ENSMUST00000192213 1040 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm43492-201ENSMUST00000199522 786 ntTSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm43129-201ENSMUST00000201237 603 ntTSL 3 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm43934-201ENSMUST00000205095 388 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm44559-201ENSMUST00000207177 1012 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 AC159476.2-201ENSMUST00000216221 418 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 AC159462.2-201ENSMUST00000217559 463 ntTSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 Gm19169-201ENSMUST00000220109 1246 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC7.01□□□□□ -1.29
Col8a1Q00780 AC165287.1-201ENSMUST00000224985 178 ntBASIC7.01□□□□□ -1.29
Col8a1Q00780 AC167019.4-201ENSMUST00000226494 1070 ntBASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 88.5 ms