Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Gm25265-201ENSMUST00000158520 347 ntBASIC6.91□□□□□ -1.3
P20040 Gm8439-201ENSMUST00000171482 420 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
P20040 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Mir6415-201ENSMUST00000184064 100 ntBASIC6.91□□□□□ -1.3
P20040 Mir6912-201ENSMUST00000184456 70 ntBASIC6.91□□□□□ -1.3
P20040 Gm20257-201ENSMUST00000185352 936 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Gm18970-201ENSMUST00000186040 938 ntBASIC6.91□□□□□ -1.3
P20040 Gm17979-201ENSMUST00000196646 611 ntBASIC6.91□□□□□ -1.3
P20040 Gm42889-201ENSMUST00000199480 660 ntTSL 3 BASIC6.91□□□□□ -1.3
P20040 Kcne3-207ENSMUST00000208260 929 ntAPPRIS P1 TSL 3 BASIC6.91□□□□□ -1.3
P20040 1500002F19Rik-203ENSMUST00000211184 375 ntTSL 3 BASIC6.91□□□□□ -1.3
P20040 Olfr863-ps1-201ENSMUST00000213073 929 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
P20040 Gm7441-201ENSMUST00000220697 1074 ntBASIC6.91□□□□□ -1.3
P20040 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 AC151982.1-201ENSMUST00000223546 464 ntBASIC6.91□□□□□ -1.3
P20040 AC134913.1-201ENSMUST00000224563 504 ntBASIC6.91□□□□□ -1.3
P20040 AC122877.1-201ENSMUST00000228873 218 ntBASIC6.91□□□□□ -1.3
P20040 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
P20040 Slc36a3-202ENSMUST00000069816 893 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Rps6-ps2-201ENSMUST00000079841 747 ntBASIC6.91□□□□□ -1.3
P20040 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Vmn2r-ps99-202ENSMUST00000223517 2338 ntBASIC6.91□□□□□ -1.3
P20040 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 AC125074.1-201ENSMUST00000227970 1331 ntBASIC6.91□□□□□ -1.3
P20040 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Usp50-201ENSMUST00000028842 1361 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Ms4a6d-201ENSMUST00000025582 1418 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Gm28813-201ENSMUST00000186293 1497 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm29324-202ENSMUST00000188242 1497 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm14151-201ENSMUST00000109890 2672 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
P20040 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Grik1-210ENSMUST00000228034 2708 ntBASIC6.91□□□□□ -1.3
P20040 Gm10248-201ENSMUST00000090409 2731 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Gm18305-201ENSMUST00000216532 2128 ntBASIC6.91□□□□□ -1.3
P20040 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC6.91□□□□□ -1.3
P20040 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Armc8-203ENSMUST00000186049 2761 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
P20040 Gm43792-201ENSMUST00000202492 2210 ntBASIC6.91□□□□□ -1.3
P20040 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
P20040 Gm32389-201ENSMUST00000209312 1621 ntTSL 3 BASIC6.9□□□□□ -1.3
P20040 Lemd1-205ENSMUST00000188169 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.9□□□□□ -1.3
P20040 Stambpl1-202ENSMUST00000119603 1664 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.9□□□□□ -1.3
P20040 Fbxo16-204ENSMUST00000226005 3700 ntAPPRIS ALT2 BASIC6.9□□□□□ -1.3
P20040 Gm3203-201ENSMUST00000197670 2389 ntBASIC6.9□□□□□ -1.3
P20040 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Gprasp1-202ENSMUST00000113145 5640 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Gm38014-201ENSMUST00000193349 2612 ntBASIC6.9□□□□□ -1.3
P20040 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Plch1-203ENSMUST00000084105 6245 ntAPPRIS P3 TSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Adgrv1-202ENSMUST00000109565 7094 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Gm22271-201ENSMUST00000104035 128 ntBASIC6.9□□□□□ -1.3
P20040 Gm23131-201ENSMUST00000104253 132 ntBASIC6.9□□□□□ -1.3
P20040 Gm12959-201ENSMUST00000119396 403 ntBASIC6.9□□□□□ -1.3
P20040 Gm11933-201ENSMUST00000121550 375 ntBASIC6.9□□□□□ -1.3
P20040 Gm23822-201ENSMUST00000158739 128 ntBASIC6.9□□□□□ -1.3
P20040 Gm24899-201ENSMUST00000158892 73 ntBASIC6.9□□□□□ -1.3
P20040 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC6.9□□□□□ -1.3
P20040 Gm21886-201ENSMUST00000178391 645 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
P20040 Calm5-201ENSMUST00000183198 589 ntBASIC6.9□□□□□ -1.3
P20040 1500004A13Rik-201ENSMUST00000183374 891 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
P20040 Gm27288-201ENSMUST00000184215 80 ntBASIC6.9□□□□□ -1.3
P20040 Gm27597-201ENSMUST00000184365 80 ntBASIC6.9□□□□□ -1.3
P20040 Gm27506-201ENSMUST00000184558 80 ntBASIC6.9□□□□□ -1.3
P20040 Gm27529-201ENSMUST00000184975 80 ntBASIC6.9□□□□□ -1.3
P20040 Gm27907-201ENSMUST00000185101 80 ntBASIC6.9□□□□□ -1.3
P20040 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC6.9□□□□□ -1.3
P20040 Gm43560-201ENSMUST00000198100 773 ntBASIC6.9□□□□□ -1.3
P20040 Gm42959-201ENSMUST00000202184 212 ntBASIC6.9□□□□□ -1.3
P20040 Gm3604-203ENSMUST00000202194 736 ntTSL 3 BASIC6.9□□□□□ -1.3
P20040 Gm39121-201ENSMUST00000208847 525 ntBASIC6.9□□□□□ -1.3
P20040 2310008N11Rik-202ENSMUST00000210263 422 ntTSL 3 BASIC6.9□□□□□ -1.3
P20040 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC6.9□□□□□ -1.3
P20040 Olfr503-202ENSMUST00000211693 966 ntAPPRIS ALT1 BASIC6.9□□□□□ -1.3
P20040 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC6.9□□□□□ -1.3
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms