Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Gm44033-201ENSMUST00000203699 695 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm30781-201ENSMUST00000204743 216 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm7482-201ENSMUST00000206446 505 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Olfr977-ps1-201ENSMUST00000217438 943 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hmgb3O54879 AC154249.1-201ENSMUST00000226296 320 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Ly6f-201ENSMUST00000023247 877 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Slurp2-201ENSMUST00000057932 545 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Lgals9-201ENSMUST00000073001 1074 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Mir25-201ENSMUST00000083460 84 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm6378-201ENSMUST00000084199 444 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm10155-201ENSMUST00000084598 483 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Cbx3-ps5-201ENSMUST00000091545 544 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Olfr444-201ENSMUST00000095955 1050 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm15433-201ENSMUST00000097671 891 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm826-201ENSMUST00000099127 637 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Arhgap17-201ENSMUST00000098060 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 3110043O21Rik-201ENSMUST00000084724 3413 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 D3Ertd751e-207ENSMUST00000146165 3574 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Fancd2-201ENSMUST00000036340 5512 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm15509-201ENSMUST00000162615 2162 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm28485-201ENSMUST00000185300 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm28684-201ENSMUST00000185586 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm28422-201ENSMUST00000186112 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm29447-201ENSMUST00000186407 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm29628-201ENSMUST00000187206 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm28316-201ENSMUST00000187576 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm29313-201ENSMUST00000187866 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm28252-201ENSMUST00000188457 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm28950-203ENSMUST00000188826 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm29303-201ENSMUST00000189215 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm28220-201ENSMUST00000189607 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm29342-202ENSMUST00000189689 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm29116-202ENSMUST00000189963 1500 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm29081-203ENSMUST00000190140 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm28726-201ENSMUST00000190994 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm29386-203ENSMUST00000191185 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm33954-202ENSMUST00000195188 1500 ntTSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Fcrl5-204ENSMUST00000193229 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm10623-201ENSMUST00000209081 2639 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm26555-202ENSMUST00000180882 3726 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Trdc-201ENSMUST00000196323 3865 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Nt5c1b-205ENSMUST00000217944 1975 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 St7-203ENSMUST00000053148 2288 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Plb1-205ENSMUST00000202201 3539 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 March1-201ENSMUST00000039540 2733 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Ceacam1-202ENSMUST00000098668 1478 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Mtbp-205ENSMUST00000170046 3197 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm37258-201ENSMUST00000191734 1627 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Olfr702-204ENSMUST00000219803 1646 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 4933430I17Rik-201ENSMUST00000062145 1783 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Olfr827-202ENSMUST00000213568 8457 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm25594-201ENSMUST00000102274 82 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Hmgn2-202ENSMUST00000102552 676 ntAPPRIS P2 TSL 2 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Calr4-203ENSMUST00000106629 1583 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Mir467f-201ENSMUST00000116923 120 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm12948-201ENSMUST00000119406 682 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm15369-201ENSMUST00000119681 394 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm12517-201ENSMUST00000122082 425 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 n-R5s43-201ENSMUST00000122739 110 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm25804-201ENSMUST00000122785 188 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm11300-201ENSMUST00000137651 565 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm11722-201ENSMUST00000138702 534 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm24004-201ENSMUST00000158460 178 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm6669-201ENSMUST00000179088 997 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm18828-201ENSMUST00000180475 857 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm16596-201ENSMUST00000180576 604 ntTSL 3 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm28980-201ENSMUST00000187877 219 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm29485-201ENSMUST00000190220 282 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm42464-201ENSMUST00000196717 417 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm43743-201ENSMUST00000197898 697 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm43235-201ENSMUST00000200121 297 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm30270-201ENSMUST00000202675 524 ntTSL 2 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm18988-201ENSMUST00000205601 746 ntBASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm45040-201ENSMUST00000207742 578 ntTSL 3 BASIC6.29□□□□□ -1.4
Hmgb3O54879 Gm8575-201ENSMUST00000210262 521 ntBASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms