Protein–RNA interactions for Protein: Q9ES34

Ube3b, Ubiquitin-protein ligase E3B, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3bQ9ES34 Cd36-201ENSMUST00000082367 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Uhrf1-203ENSMUST00000113038 3483 ntAPPRIS ALT2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Fmnl1-203ENSMUST00000107027 3693 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Trim2-205ENSMUST00000107693 5755 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm15217-201ENSMUST00000111826 733 ntAPPRIS P5 TSL 2 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm6275-201ENSMUST00000118971 1122 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm13988-201ENSMUST00000119363 288 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm13633-201ENSMUST00000120668 898 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm11203-201ENSMUST00000122169 741 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Stard6-202ENSMUST00000164223 976 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Ston2-203ENSMUST00000164713 2944 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm3252-202ENSMUST00000178748 450 ntTSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm26717-201ENSMUST00000181713 1418 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm26977-201ENSMUST00000183151 996 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm29633-204ENSMUST00000187737 675 ntTSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm18357-201ENSMUST00000188184 580 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm5539-201ENSMUST00000192177 966 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm37982-201ENSMUST00000193076 561 ntTSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm37432-201ENSMUST00000195294 341 ntTSL 2 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm42752-201ENSMUST00000198394 1106 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm5981-201ENSMUST00000199912 487 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm33926-201ENSMUST00000208755 357 ntTSL 2 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm34263-201ENSMUST00000214010 352 ntTSL 3 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gja10-202ENSMUST00000219644 1857 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm46313-201ENSMUST00000220463 547 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm35514-201ENSMUST00000221615 352 ntTSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 CT033774.2-201ENSMUST00000222079 256 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Crb1-201ENSMUST00000059825 5901 ntAPPRIS P2 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Sprr1b-201ENSMUST00000062160 830 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm9761-201ENSMUST00000075650 492 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Olfr784-201ENSMUST00000082342 960 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Ocm-202ENSMUST00000085704 330 ntAPPRIS P1 TSL 3 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Tshz2-201ENSMUST00000109157 5083 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Prox2-201ENSMUST00000110249 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Kpna3-201ENSMUST00000022496 4069 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Myom1-203ENSMUST00000179759 5308 ntAPPRIS ALT2 TSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Upp2-203ENSMUST00000102755 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Slfn5-202ENSMUST00000108157 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Akr1c20-201ENSMUST00000078239 1317 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Lrrc9-203ENSMUST00000161284 3817 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Adgrl2-213ENSMUST00000199059 4637 ntTSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm32552-201ENSMUST00000217849 2291 ntTSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Nup98-203ENSMUST00000210682 6694 ntAPPRIS P1 TSL 5 BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm10472-201ENSMUST00000193014 2102 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Trim39-205ENSMUST00000173369 2914 ntTSL 1 (best) BASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm20236-201ENSMUST00000193037 4540 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm37094-201ENSMUST00000193352 4540 ntBASIC10.03□□□□□ -0.8
Ube3bQ9ES34 Gm46199-201ENSMUST00000220373 1693 ntBASIC10.02□□□□□ -0.8
Ube3bQ9ES34 Tdpoz1-202ENSMUST00000181541 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ube3bQ9ES34 Tmem18-201ENSMUST00000057151 2971 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ube3bQ9ES34 Olfr1349-205ENSMUST00000213504 4935 ntAPPRIS P1 TSL 2 BASIC10.02□□□□□ -0.8
Ube3bQ9ES34 Neu3-201ENSMUST00000036331 3341 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ube3bQ9ES34 Cfap43-205ENSMUST00000160247 5264 ntTSL 5 BASIC10.02□□□□□ -0.8
Ube3bQ9ES34 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
Ube3bQ9ES34 Gm1070-201ENSMUST00000114185 2874 ntTSL 1 (best) BASIC10.02□□□□□ -0.8
Ube3bQ9ES34 Serpina3f-201ENSMUST00000101080 2207 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Abca17-201ENSMUST00000039324 5202 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Zfp286-201ENSMUST00000054654 3051 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 CT009530.1-201ENSMUST00000227348 2927 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm16130-201ENSMUST00000153106 2799 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Srp72-201ENSMUST00000101087 3625 ntAPPRIS P2 TSL 2 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm25761-201ENSMUST00000103983 128 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 4930449I24Rik-201ENSMUST00000110598 1168 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm11676-201ENSMUST00000120443 490 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm12178-201ENSMUST00000120545 330 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm11891-201ENSMUST00000121241 619 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm5931-201ENSMUST00000121308 477 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Astx3-201ENSMUST00000123508 1150 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Chn1os1-201ENSMUST00000123613 636 ntTSL 3 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm16267-201ENSMUST00000140569 732 ntTSL 3 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Rubie-201ENSMUST00000151828 1137 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm16031-201ENSMUST00000153253 448 ntTSL 2 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm25413-201ENSMUST00000158544 312 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 U2af1l4-205ENSMUST00000163482 668 ntTSL 5 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Snhg7-201ENSMUST00000181621 139 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Mir6922-201ENSMUST00000185099 66 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 1700029J03Rik-202ENSMUST00000189879 712 ntTSL 5 BASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm3142-201ENSMUST00000190107 414 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm19224-201ENSMUST00000190477 793 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm18183-201ENSMUST00000191024 615 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm37506-201ENSMUST00000192008 143 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm38061-201ENSMUST00000192490 365 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Gm43344-201ENSMUST00000198723 1229 ntBASIC10.02□□□□□ -0.81
Ube3bQ9ES34 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms