Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gprasp1-203ENSMUST00000113147 5611 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Hsd11b1-201ENSMUST00000016338 1623 ntAPPRIS P2 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm42568-201ENSMUST00000195639 1841 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Magea10-201ENSMUST00000088481 1821 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Haus2-203ENSMUST00000124187 3154 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm12838-201ENSMUST00000116278 325 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Hmgn2-ps1-201ENSMUST00000120716 279 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Bloodlinc-201ENSMUST00000126237 679 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Crem-218ENSMUST00000139537 807 ntTSL 2 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 4930527B05Rik-201ENSMUST00000141593 602 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 F730035M05Rik-201ENSMUST00000145871 1296 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm16585-201ENSMUST00000161442 610 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 S100a10-203ENSMUST00000170612 477 ntAPPRIS P1 TSL 3 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm23413-201ENSMUST00000175521 125 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Vmn2r-ps52-201ENSMUST00000176211 612 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Smarca2-213ENSMUST00000176698 955 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm10182-201ENSMUST00000178676 273 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm26875-201ENSMUST00000181006 950 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm28126-201ENSMUST00000185286 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm6644-201ENSMUST00000186507 951 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Scgb2b4-ps-201ENSMUST00000186705 340 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm28212-201ENSMUST00000187114 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 9930111H07Rik-201ENSMUST00000187270 821 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm29568-201ENSMUST00000187884 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm29080-201ENSMUST00000188565 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm28944-201ENSMUST00000188946 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm28908-201ENSMUST00000189002 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm29477-201ENSMUST00000189860 499 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm29078-201ENSMUST00000190611 356 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm38033-201ENSMUST00000192037 269 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm37799-201ENSMUST00000194018 547 ntTSL 3 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm43103-201ENSMUST00000199021 802 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 1600020E01Rik-203ENSMUST00000204008 713 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm44245-201ENSMUST00000204304 232 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm2734-201ENSMUST00000208561 743 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm36862-202ENSMUST00000222758 1051 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 AC163667.2-201ENSMUST00000223769 791 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm10143-202ENSMUST00000150038 3332 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm38014-201ENSMUST00000193349 2612 ntBASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Zfp58-204ENSMUST00000171518 2300 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm10822-201ENSMUST00000181596 2320 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Zranb1-201ENSMUST00000033265 2210 ntAPPRIS P2 TSL 2 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 2310069B03Rik-202ENSMUST00000186147 1833 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Krt39-201ENSMUST00000076948 1449 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 1700010N08Rik-202ENSMUST00000188166 1323 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Gm20547-202ENSMUST00000146299 3893 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
Nup35Q8R4R6 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Musk-205ENSMUST00000102893 3323 ntTSL 5 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm37420-201ENSMUST00000195332 2912 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Meis2-206ENSMUST00000110908 3697 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm45407-201ENSMUST00000209499 3676 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 4930545L23Rik-201ENSMUST00000138303 2502 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Btk-201ENSMUST00000033617 2540 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm37483-201ENSMUST00000194382 1484 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Rbm26-204ENSMUST00000163545 3270 ntTSL 5 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm15907-201ENSMUST00000134284 2309 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm7842-201ENSMUST00000217691 1379 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Cep112-204ENSMUST00000106724 678 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 1700029I15Rik-202ENSMUST00000111280 416 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm14450-201ENSMUST00000119984 240 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm14332-201ENSMUST00000121982 899 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Ino80c-202ENSMUST00000125169 756 ntTSL 3 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 4930439A04Rik-201ENSMUST00000137241 739 ntTSL 3 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 D330041H03Rik-203ENSMUST00000180579 605 ntTSL 5 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm18800-201ENSMUST00000186588 637 ntTSL 3 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm5696-201ENSMUST00000189850 552 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm37622-201ENSMUST00000192162 285 ntTSL 5 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm37247-201ENSMUST00000192549 730 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Rpl22l1-206ENSMUST00000194649 525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Ighv8-16-201ENSMUST00000199258 294 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm42964-201ENSMUST00000202965 382 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm44203-201ENSMUST00000203134 307 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Klk1b14-ps-201ENSMUST00000206059 777 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 AC153561.1-201ENSMUST00000215943 469 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 Gm5194-201ENSMUST00000221457 742 ntBASIC6.24□□□□□ -1.41
Nup35Q8R4R6 AC163354.1-202ENSMUST00000221460 656 ntTSL 5 BASIC6.24□□□□□ -1.41
Nup35Q8R4R6 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC6.24□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms