Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Grip1-210ENSMUST00000144825 3250 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Rars-201ENSMUST00000018992 2109 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm30340-201ENSMUST00000191898 2198 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Cd300lg-203ENSMUST00000107164 2737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Plec-218ENSMUST00000169714 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Plec-201ENSMUST00000023226 15001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Rdh12-201ENSMUST00000021548 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm12445-201ENSMUST00000117947 885 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm11649-201ENSMUST00000118214 375 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm11997-201ENSMUST00000118697 313 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm13651-201ENSMUST00000119086 1110 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm12001-201ENSMUST00000121727 913 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 4930412L05Rik-202ENSMUST00000146501 1241 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm23220-201ENSMUST00000158115 137 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Zfp661-204ENSMUST00000164551 1284 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm17051-201ENSMUST00000170787 487 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Mir6999-201ENSMUST00000183498 61 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Mir6912-201ENSMUST00000184456 70 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm18970-201ENSMUST00000186040 938 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm28677-203ENSMUST00000187144 1134 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm29416-202ENSMUST00000191328 1201 ntTSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm18692-201ENSMUST00000193047 511 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm42767-201ENSMUST00000198583 632 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm42861-201ENSMUST00000199596 634 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm18839-201ENSMUST00000204292 670 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm17909-201ENSMUST00000207587 907 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm34418-201ENSMUST00000212879 309 ntTSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm18024-201ENSMUST00000218516 690 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 1700105G05Rik-201ENSMUST00000222238 411 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm2915-201ENSMUST00000222565 787 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm7086-202ENSMUST00000228849 506 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Nup43-201ENSMUST00000040135 1286 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Vmn1r76-201ENSMUST00000058772 975 ntAPPRIS P2 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm26264-201ENSMUST00000083278 159 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Tex52-202ENSMUST00000130785 1424 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm34297-201ENSMUST00000218569 1980 ntTSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Chid1-207ENSMUST00000153191 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm42603-201ENSMUST00000199893 2146 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Sox5-201ENSMUST00000038815 7243 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Olfr212-202ENSMUST00000218028 2291 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 AC165260.6-204ENSMUST00000225571 3508 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Tcf4-206ENSMUST00000114982 3694 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Unc13b-215ENSMUST00000207569 14754 ntTSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 AC112680.1-201ENSMUST00000215435 1349 ntBASIC7.49□□□□□ -1.21
Clrn1Q8K445 Syne1-202ENSMUST00000095899 3443 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Smok2b-202ENSMUST00000162940 2306 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Gm45237-202ENSMUST00000211157 2452 ntTSL 5 BASIC7.49□□□□□ -1.21
Clrn1Q8K445 Plekhm3-201ENSMUST00000097713 8562 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Srcap-214ENSMUST00000190390 9633 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Tmem175-202ENSMUST00000078323 2374 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 AC153548.1-201ENSMUST00000219283 2661 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Tmem27-202ENSMUST00000112280 1389 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 2610037D02Rik-202ENSMUST00000185067 2997 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 C130071C03Rik-201ENSMUST00000131907 3590 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Olfr433-201ENSMUST00000052975 2406 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Ankrd27-206ENSMUST00000190503 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Blvrb-203ENSMUST00000108358 951 ntTSL 3 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm14630-201ENSMUST00000118057 246 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 2310081O03Rik-201ENSMUST00000128591 759 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm15857-201ENSMUST00000133476 789 ntTSL 3 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 A630023P12Rik-202ENSMUST00000141420 495 ntTSL 2 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Defa-ps3-201ENSMUST00000142705 282 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm22949-201ENSMUST00000158562 105 ntBASIC7.48□□□□□ -1.21
Clrn1Q8K445 Focad-208ENSMUST00000159342 5456 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm17727-201ENSMUST00000171898 643 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm9125-202ENSMUST00000180746 2325 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 6720483E21Rik-201ENSMUST00000181654 1120 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
Clrn1Q8K445 Gm28221-201ENSMUST00000185617 347 ntTSL 5 BASIC7.48□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 170.2 ms