Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 AC139569.1-201ENSMUST00000226080 614 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Gm24046-201ENSMUST00000083111 165 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Gm6767-201ENSMUST00000118650 1381 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Ms4a13-201ENSMUST00000073380 1375 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Pls3-204ENSMUST00000114059 3149 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Sptan1-203ENSMUST00000100225 7892 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Mep1a-202ENSMUST00000117137 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Ncor1-201ENSMUST00000018645 9037 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Vps54Q5SPW0 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Armcx3-201ENSMUST00000081834 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Itgb6-203ENSMUST00000112517 3537 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Olfr1212-202ENSMUST00000215781 3636 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Ms4a6b-205ENSMUST00000163078 2680 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Spag11b-202ENSMUST00000110767 1740 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 1700123J17Rik-201ENSMUST00000206035 1805 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Sipa1l1-208ENSMUST00000222298 6179 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm38661-201ENSMUST00000216555 5814 ntTSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Col25a1-202ENSMUST00000106353 6701 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm13521-201ENSMUST00000118922 866 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm16523-201ENSMUST00000121253 592 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 1700030F04Rik-202ENSMUST00000188781 617 ntTSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm37392-201ENSMUST00000192098 516 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm4259-201ENSMUST00000206489 758 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm45399-201ENSMUST00000209955 1016 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm5815-201ENSMUST00000050706 1185 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Chn1-201ENSMUST00000070579 1023 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Snora9-201ENSMUST00000082579 133 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Mef2c-222ENSMUST00000199019 4441 ntTSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Olfr1512-202ENSMUST00000214980 2082 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 AC168056.4-201ENSMUST00000223835 2567 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Tpd52l2-204ENSMUST00000108800 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Dnajb5-202ENSMUST00000084662 3302 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Gm7134-201ENSMUST00000122296 2406 ntBASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC9.31□□□□□ -0.92
Vps54Q5SPW0 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm43948-201ENSMUST00000203474 2376 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 E330035G20Rik-201ENSMUST00000221094 3002 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Zfand4-210ENSMUST00000223495 1751 ntTSL 5 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Rab2b-202ENSMUST00000100631 2619 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Patl2-201ENSMUST00000028665 2434 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm14053-201ENSMUST00000121662 470 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Prkag2os1-201ENSMUST00000134633 991 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm23222-201ENSMUST00000158117 76 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Nrbf2-202ENSMUST00000159002 583 ntTSL 3 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm5181-201ENSMUST00000183140 971 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Nxf1-205ENSMUST00000183939 1017 ntTSL 5 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 AF067063-202ENSMUST00000195234 885 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm22149-202ENSMUST00000196259 137 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm20274-201ENSMUST00000206967 584 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 A330076H08Rik-203ENSMUST00000208822 1164 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm8575-201ENSMUST00000210262 521 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 AC160966.1-203ENSMUST00000214689 1186 ntTSL 5 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 AC123920.1-201ENSMUST00000221449 384 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm18631-201ENSMUST00000223125 1043 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 AL590616.1-201ENSMUST00000223339 574 ntBASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Ifitm5-201ENSMUST00000026562 765 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Tmed5-201ENSMUST00000002837 3800 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Fbxo7-204ENSMUST00000130320 5388 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Epha5-201ENSMUST00000053733 7328 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm7954-201ENSMUST00000164967 1403 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm8082-201ENSMUST00000165349 1403 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Gm11639-201ENSMUST00000148007 3613 ntTSL 5 BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Mycbp2-201ENSMUST00000159855 15233 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Vps54Q5SPW0 Prickle2-203ENSMUST00000113446 7860 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Dsc3-203ENSMUST00000225110 3123 ntAPPRIS P2 BASIC9.29□□□□□ -0.92
Vps54Q5SPW0 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms