Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Unc79-201ENSMUST00000085079 7762 ntAPPRIS ALT2 TSL 2 BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Bves-201ENSMUST00000095715 4368 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Pkd2l1-201ENSMUST00000042026 3321 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Zfp408-202ENSMUST00000111333 3740 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sf3b2Q3UJB0 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Ankdd1b-201ENSMUST00000055607 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 AC124572.1-201ENSMUST00000218155 2406 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Cyp2c37-201ENSMUST00000049178 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 4930448K20Rik-202ENSMUST00000182072 1433 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Cdkl4-201ENSMUST00000086545 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Nufip1-201ENSMUST00000022586 3974 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm26601-201ENSMUST00000181427 3551 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm43775-201ENSMUST00000201019 3395 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm12202-201ENSMUST00000121196 811 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm26184-201ENSMUST00000157686 131 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm5698-201ENSMUST00000178317 724 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm29016-201ENSMUST00000187523 1013 ntTSL 3 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 2810404M03Rik-201ENSMUST00000188324 1245 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 1700063K16Rik-202ENSMUST00000191341 952 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm28644-201ENSMUST00000191364 585 ntTSL 2 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm43116-201ENSMUST00000199789 195 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm2505-201ENSMUST00000200413 825 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm35520-201ENSMUST00000209235 784 ntTSL 5 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Gm35998-201ENSMUST00000212862 838 ntTSL 5 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Olfr101-202ENSMUST00000214376 2989 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 AC154785.1-201ENSMUST00000223280 572 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 AL590616.1-201ENSMUST00000223339 574 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Olfr788-201ENSMUST00000056961 936 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Tprkb-201ENSMUST00000067137 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Cttnbp2-201ENSMUST00000090601 5183 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 4930590J08Rik-201ENSMUST00000059318 2802 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Meis2-205ENSMUST00000110907 3718 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Flrt3-202ENSMUST00000110057 3977 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Cass4-202ENSMUST00000103073 3600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Rpgr-205ENSMUST00000115533 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Cpa4-201ENSMUST00000049251 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Cth-201ENSMUST00000118539 1815 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Ece2-208ENSMUST00000120394 3432 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Nr1i3-208ENSMUST00000155126 2980 ntTSL 2 BASIC10.26□□□□□ -0.77
Sf3b2Q3UJB0 Tmprss11g-202ENSMUST00000140095 2314 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gtf3c2-210ENSMUST00000202639 4200 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Atf2-201ENSMUST00000055833 4210 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Slc25a13-201ENSMUST00000015256 3067 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Lrtm2-202ENSMUST00000112756 3569 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm28469-201ENSMUST00000186374 2166 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm28134-201ENSMUST00000188690 2166 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm37075-201ENSMUST00000191888 2166 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm37574-201ENSMUST00000194264 2166 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Tmem33-202ENSMUST00000160352 5322 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm43366-201ENSMUST00000199829 2655 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 4921509C19Rik-201ENSMUST00000080132 2684 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Olfr117-202ENSMUST00000213638 3183 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Rad51ap1-201ENSMUST00000112220 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Tenm4-201ENSMUST00000107162 11021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Ing5-201ENSMUST00000027505 4533 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Hrh1-203ENSMUST00000160780 2782 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Olfr380-203ENSMUST00000127789 1536 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Flii-201ENSMUST00000002889 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Iglv1-201ENSMUST00000103746 391 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Olfr585-201ENSMUST00000104881 1030 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm13633-201ENSMUST00000120668 898 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 4933431E20Rik-206ENSMUST00000138472 483 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm13663-202ENSMUST00000145563 643 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm7420-201ENSMUST00000162836 842 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm25692-201ENSMUST00000175444 125 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm28580-201ENSMUST00000186767 88 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm37526-201ENSMUST00000194640 619 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm8489-201ENSMUST00000209876 1152 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 AC069561.1-201ENSMUST00000213750 424 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 AC157085.1-201ENSMUST00000216343 162 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 AC155929.4-201ENSMUST00000218493 491 ntTSL 3 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Olfr680-ps1-201ENSMUST00000042676 936 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gpr87-201ENSMUST00000056898 1080 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Muc6-201ENSMUST00000062451 8650 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Zscan26-202ENSMUST00000110485 4366 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm42765-202ENSMUST00000200017 3131 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm10259-201ENSMUST00000091289 1590 ntBASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Mapk6-202ENSMUST00000168937 4089 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm29660-201ENSMUST00000185631 2166 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm29309-201ENSMUST00000186251 2166 ntTSL 5 BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm28317-201ENSMUST00000187200 2166 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Sf3b2Q3UJB0 Gm28254-201ENSMUST00000189207 2166 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 164.6 ms