Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 4933408N05Rik-201ENSMUST00000139864 1584 ntTSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Serpina1f-201ENSMUST00000021490 1569 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm5622-201ENSMUST00000096170 1581 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 AC169985.1-201ENSMUST00000223648 2439 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 n-R5s90-201ENSMUST00000103968 118 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm12133-201ENSMUST00000121775 661 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm11520-201ENSMUST00000122837 630 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Ang-ps1-201ENSMUST00000162314 436 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm17235-201ENSMUST00000169128 964 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Sfta2-202ENSMUST00000174521 649 ntTSL 3 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm26619-201ENSMUST00000180396 1073 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 1190005I06Rik-203ENSMUST00000180677 533 ntAPPRIS ALT2 TSL 3 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm27043-201ENSMUST00000182807 958 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Mir7060-201ENSMUST00000183486 137 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm27403-201ENSMUST00000184662 214 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm27782-201ENSMUST00000185059 199 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm18183-201ENSMUST00000191024 615 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm37436-201ENSMUST00000193842 1085 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm23927-202ENSMUST00000199928 216 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm3198-201ENSMUST00000208725 1026 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC8.88□□□□□ -0.99
Hmgb1P63158 AC137127.2-201ENSMUST00000215086 935 ntTSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm18030-201ENSMUST00000222163 731 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm10054-201ENSMUST00000223362 431 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 AC122533.2-201ENSMUST00000223772 545 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 AC160109.1-201ENSMUST00000225592 729 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Olfr1367-201ENSMUST00000059216 1055 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm17541-201ENSMUST00000080062 525 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm15433-201ENSMUST00000097671 891 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Entpd5-205ENSMUST00000120942 4881 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm6493-201ENSMUST00000159889 1786 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Spic-201ENSMUST00000004473 1763 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Proz-201ENSMUST00000033822 3361 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Pramef6-201ENSMUST00000081645 1487 ntAPPRIS P2 TSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Zzz3-202ENSMUST00000106100 7607 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm6418-201ENSMUST00000118325 3577 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Msr1-201ENSMUST00000026021 1424 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 AC163032.1-201ENSMUST00000220671 2970 ntBASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Acsl1-203ENSMUST00000110372 3429 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm9105-201ENSMUST00000120160 1398 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm7978-202ENSMUST00000201129 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Mbd4-201ENSMUST00000032469 3614 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 BC061212-201ENSMUST00000094587 1897 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Zfp68-202ENSMUST00000085852 3318 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Csnk1g1-209ENSMUST00000205379 4001 ntAPPRIS ALT1 TSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Grik2-205ENSMUST00000218598 3245 ntTSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm2098-201ENSMUST00000189146 1763 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm28720-201ENSMUST00000190728 3156 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Trpv1-202ENSMUST00000102526 3361 ntAPPRIS P2 TSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm12684-201ENSMUST00000118675 999 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm11348-201ENSMUST00000118813 318 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm15572-201ENSMUST00000119248 593 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm12773-201ENSMUST00000120134 587 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm11953-201ENSMUST00000122352 1003 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Grip1os1-201ENSMUST00000126965 1084 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm9458-201ENSMUST00000135273 727 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm22214-201ENSMUST00000157563 172 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm26040-201ENSMUST00000158147 161 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm8877-201ENSMUST00000172657 655 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Vmn1r227-202ENSMUST00000179914 1026 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm5327-201ENSMUST00000182864 1009 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.87□□□□□ -0.99
Hmgb1P63158 5031425E22Rik-205ENSMUST00000191186 719 ntTSL 3 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm18865-201ENSMUST00000193011 1171 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm35801-201ENSMUST00000193927 479 ntTSL 3 BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm37560-201ENSMUST00000194289 1000 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm9729-201ENSMUST00000196364 265 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm43837-201ENSMUST00000200306 668 ntTSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 9330102E08Rik-201ENSMUST00000204642 3843 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Hmgb1P63158 Gm8948-201ENSMUST00000216371 370 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 AC159297.1-201ENSMUST00000218689 290 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 AC134537.1-201ENSMUST00000219205 265 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC8.87□□□□□ -0.99
Hmgb1P63158 AC132587.1-201ENSMUST00000220562 166 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 AC126554.4-201ENSMUST00000221055 409 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 AC159312.1-201ENSMUST00000221508 856 ntTSL 2 BASIC8.87□□□□□ -0.99
Hmgb1P63158 CT030732.1-201ENSMUST00000226885 246 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Hmgb1P63158 AC101831.1-201ENSMUST00000228245 691 ntBASIC8.87□□□□□ -0.99
Hmgb1P63158 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms