Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Zbtb14-202ENSMUST00000112674 3743 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Zfp27-206ENSMUST00000172448 2460 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Crem-204ENSMUST00000122958 2254 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm32305-201ENSMUST00000221742 1899 ntTSL 5 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 1810013D15Rik-203ENSMUST00000196971 1450 ntTSL 5 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Olfr608-201ENSMUST00000213546 1482 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm13192-201ENSMUST00000101199 208 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Phyhd1-203ENSMUST00000113643 1195 ntTSL 5 BASIC6.31□□□□□ -1.4
Hmgb3O54879 1700015F17Rik-201ENSMUST00000115447 710 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm10443-201ENSMUST00000119024 210 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Rps25-ps1-201ENSMUST00000119876 378 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm15574-201ENSMUST00000119937 405 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Snhg17-202ENSMUST00000138592 342 ntTSL 2 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 2810433D01Rik-202ENSMUST00000154798 1045 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm16103-201ENSMUST00000163003 1279 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm17149-201ENSMUST00000164712 375 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Hcfc1r1-202ENSMUST00000179928 597 ntAPPRIS ALT2 TSL 3 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm20914-201ENSMUST00000180372 684 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
Hmgb3O54879 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Pea15b-202ENSMUST00000183185 555 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm28478-201ENSMUST00000185802 183 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm28983-201ENSMUST00000186685 614 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm28150-201ENSMUST00000187305 614 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Scgb1b12-201ENSMUST00000188355 417 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm28377-201ENSMUST00000189695 720 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 1700009C05Rik-201ENSMUST00000191101 788 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm20568-201ENSMUST00000197129 208 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm42908-201ENSMUST00000197508 870 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm5291-201ENSMUST00000201965 899 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm34701-201ENSMUST00000204213 849 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm44764-202ENSMUST00000204912 671 ntTSL 3 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm18058-201ENSMUST00000207385 492 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 AC154264.2-201ENSMUST00000216569 403 ntTSL 5 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm19810-201ENSMUST00000218521 251 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm18623-201ENSMUST00000219860 953 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm6129-201ENSMUST00000220725 801 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Rhno1-207ENSMUST00000223237 1081 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Hmgb3O54879 AC157772.1-201ENSMUST00000226266 365 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 AC139758.2-201ENSMUST00000228380 529 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm14002-201ENSMUST00000123574 2839 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm13301-201ENSMUST00000121728 2446 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Slc22a26-201ENSMUST00000065634 2007 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm43982-201ENSMUST00000204995 1829 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC6.31□□□□□ -1.4
Hmgb3O54879 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Enpp4-202ENSMUST00000143137 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Npr3-204ENSMUST00000228489 1969 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Gm43398-201ENSMUST00000196584 2742 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
Hmgb3O54879 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 4933416E14Rik-202ENSMUST00000137955 1938 ntBASIC6.31□□□□□ -1.4
Hmgb3O54879 Fmo9-202ENSMUST00000148677 2462 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Hmgb3O54879 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Dpy19l1-201ENSMUST00000115277 4747 ntTSL 2 BASIC6.3□□□□□ -1.4
Hmgb3O54879 AC162467.2-201ENSMUST00000219397 2571 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 C1s1-204ENSMUST00000162443 2906 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 CT010505.3-201ENSMUST00000227835 1651 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Mapk10-206ENSMUST00000133069 2732 ntTSL 2 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gcnt2-202ENSMUST00000069958 3929 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Zscan30-201ENSMUST00000115829 484 ntTSL 2 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Olfr1343-ps1-201ENSMUST00000117414 914 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm15627-201ENSMUST00000140421 437 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm13267-202ENSMUST00000150099 281 ntTSL 2 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm12996-201ENSMUST00000151670 636 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm23533-201ENSMUST00000157540 245 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm16541-201ENSMUST00000160992 614 ntTSL 3 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm17053-201ENSMUST00000163501 495 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm17235-201ENSMUST00000169128 964 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm26505-201ENSMUST00000176208 166 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm7456-201ENSMUST00000182862 1011 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Mir8097-201ENSMUST00000185150 119 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 4930432M17Rik-202ENSMUST00000196899 1128 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Hmgb3O54879 Igkv12-42-201ENSMUST00000198769 327 ntBASIC6.3□□□□□ -1.4
Hmgb3O54879 Gm6308-201ENSMUST00000203226 313 ntBASIC6.3□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 98.7 ms