Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Hrh2-201ENSMUST00000038101 2789 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Nup88Q8CEC0 Vmn2r55-202ENSMUST00000172743 2346 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Zfyve9-201ENSMUST00000042185 2170 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Pafah2-202ENSMUST00000105870 3180 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm44104-201ENSMUST00000204736 3777 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 1500026H17Rik-201ENSMUST00000181598 3027 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm37199-201ENSMUST00000193881 4065 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Ppih-204ENSMUST00000106319 622 ntTSL 3 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm15574-201ENSMUST00000119937 405 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm11585-201ENSMUST00000120901 569 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Klra13-ps-202ENSMUST00000144414 769 ntTSL 5 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm11551-201ENSMUST00000147438 410 ntTSL 2 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 2610035D17Rik-204ENSMUST00000150712 947 ntTSL 2 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Svs3a-201ENSMUST00000017147 1191 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 1700015G11Rik-201ENSMUST00000180038 397 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Mir8114-201ENSMUST00000183582 111 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm28193-201ENSMUST00000189863 615 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm29517-201ENSMUST00000190744 351 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm42965-201ENSMUST00000201254 250 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm18973-201ENSMUST00000205814 511 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm19810-201ENSMUST00000218521 251 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Uqcrb-201ENSMUST00000021993 535 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm7086-202ENSMUST00000228849 506 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Olfr24-201ENSMUST00000066997 1157 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Olfr224-201ENSMUST00000081102 945 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm17199-201ENSMUST00000097296 416 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Plac8-202ENSMUST00000097437 738 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm15433-201ENSMUST00000097671 891 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Upf3b-201ENSMUST00000076265 2344 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Folh1-201ENSMUST00000001824 3125 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Trim2-206ENSMUST00000107695 7200 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Muc6-203ENSMUST00000190907 8757 ntAPPRIS P5 TSL 5 BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 A530064D06Rik-202ENSMUST00000053612 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Gm43161-201ENSMUST00000197020 1688 ntBASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Nup88Q8CEC0 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm38251-201ENSMUST00000192968 2575 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 AC168056.4-201ENSMUST00000223835 2567 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Ptpn13-201ENSMUST00000048957 7915 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm11649-201ENSMUST00000118214 375 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm8084-201ENSMUST00000120807 752 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Mir1962-201ENSMUST00000157516 121 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm24130-201ENSMUST00000158536 151 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Rpl29-ps1-201ENSMUST00000161849 508 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Commd3-212ENSMUST00000171845 938 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Trav9d-2-201ENSMUST00000178824 337 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Trav9n-2-201ENSMUST00000180097 337 ntAPPRIS ALT2 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm28728-201ENSMUST00000189087 405 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm29145-201ENSMUST00000189914 456 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm17979-201ENSMUST00000196646 611 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm43699-201ENSMUST00000201312 818 ntTSL 3 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm17995-201ENSMUST00000209266 530 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm4804-203ENSMUST00000222542 577 ntTSL 3 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 1700001C19Rik-202ENSMUST00000073143 614 ntAPPRIS ALT2 TSL 2 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Olfr1504-201ENSMUST00000078282 1085 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Myo1h-201ENSMUST00000124316 2877 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 AC158686.1-201ENSMUST00000218068 2332 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Nt5c2-201ENSMUST00000086961 3745 ntTSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 AC126251.1-201ENSMUST00000228170 2707 ntBASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Adgrl2-212ENSMUST00000198779 4592 ntTSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Adgrl3-205ENSMUST00000117985 4974 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Adgrl3-212ENSMUST00000120144 4999 ntTSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 4930544G11Rik-201ENSMUST00000043382 1406 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Tmprss11g-201ENSMUST00000134179 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Gm29128-201ENSMUST00000186448 2858 ntTSL 5 BASIC9.22□□□□□ -0.93
Nup88Q8CEC0 Ighd-202ENSMUST00000194162 1806 ntAPPRIS P5 BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 AC122878.1-201ENSMUST00000227716 1460 ntBASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Gm13102-203ENSMUST00000105761 2281 ntAPPRIS P2 TSL 2 BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Btbd16-201ENSMUST00000048453 3434 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Olfr1157-201ENSMUST00000099841 4621 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Pcnx4-201ENSMUST00000044352 4300 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Gm44581-201ENSMUST00000206227 1693 ntTSL 5 BASIC9.21□□□□□ -0.93
Nup88Q8CEC0 Ctps2-201ENSMUST00000033727 3353 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Igkv8-30-201ENSMUST00000103378 368 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm24257-201ENSMUST00000104472 131 ntBASIC9.21□□□□□ -0.94
Nup88Q8CEC0 Gm15572-201ENSMUST00000119248 593 ntBASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms