Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Slu7-201ENSMUST00000020681 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Cyp2c44-202ENSMUST00000211830 1557 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Sgcg-201ENSMUST00000077954 3515 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ccdc38Q8CDN8 Gm38331-201ENSMUST00000195719 2671 ntBASIC8.77□□□□□ -1
Ccdc38Q8CDN8 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC8.77□□□□□ -1
Ccdc38Q8CDN8 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC8.77□□□□□ -1
Ccdc38Q8CDN8 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ccdc38Q8CDN8 Olfr78-202ENSMUST00000168007 1962 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1
Ccdc38Q8CDN8 Crb1-202ENSMUST00000196402 2711 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 4933431K23Rik-204ENSMUST00000209273 2857 ntTSL 5 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Ap5s1-202ENSMUST00000110206 703 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm9392-201ENSMUST00000119337 554 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm15507-203ENSMUST00000140958 658 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Nol12-205ENSMUST00000149580 646 ntTSL 5 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm16554-201ENSMUST00000159471 460 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 6530403H02Rik-201ENSMUST00000182099 402 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 4930533D04Rik-201ENSMUST00000185478 788 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm28645-201ENSMUST00000185859 564 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 4930449E01Rik-202ENSMUST00000188698 532 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm8010-201ENSMUST00000194128 873 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm5851-201ENSMUST00000194132 1204 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm44725-201ENSMUST00000205307 391 ntTSL 5 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Tmem147-206ENSMUST00000208169 537 ntTSL 5 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Olfr472-202ENSMUST00000210420 1083 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 AC100209.1-201ENSMUST00000225562 409 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Pglyrp4-201ENSMUST00000047745 1218 ntAPPRIS P3 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 BC048671-201ENSMUST00000054799 1212 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm5407-201ENSMUST00000080694 747 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm7275-201ENSMUST00000088296 744 ntAPPRIS P1 BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Mir486-201ENSMUST00000093576 128 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Vmn2r-ps95-201ENSMUST00000222423 2316 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 AC126251.1-201ENSMUST00000228170 2707 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Cops2-203ENSMUST00000110463 3392 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Birc2-202ENSMUST00000074246 3130 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Psg-ps1-201ENSMUST00000165490 1574 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm42630-201ENSMUST00000195908 3448 ntBASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Gm44850-201ENSMUST00000205621 1329 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Lars-201ENSMUST00000097590 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
Ccdc38Q8CDN8 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Calcr-205ENSMUST00000171613 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Prdm10-205ENSMUST00000215847 3519 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Cav1-202ENSMUST00000115453 2746 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gpr35-201ENSMUST00000027489 3270 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Serpina1d-201ENSMUST00000078869 1394 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Vmn2r12-201ENSMUST00000095922 2496 ntAPPRIS P1 TSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Cep72-201ENSMUST00000036456 3641 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Masp2-201ENSMUST00000052060 3058 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 St6galnac3-204ENSMUST00000200397 8169 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Vmn1r113-202ENSMUST00000173723 924 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm45475-201ENSMUST00000209381 309 ntBASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Olfr471-201ENSMUST00000210091 936 ntBASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 AC119987.1-201ENSMUST00000212316 848 ntBASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm18024-201ENSMUST00000218516 690 ntBASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 AC124686.1-201ENSMUST00000225546 522 ntBASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 AC166822.2-201ENSMUST00000228746 275 ntBASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Yipf7-201ENSMUST00000031045 1219 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm10134-201ENSMUST00000074761 381 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm18451-201ENSMUST00000196759 1719 ntBASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Phc3-206ENSMUST00000129817 3019 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm805-201ENSMUST00000181667 3160 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Gm16638-202ENSMUST00000208892 8508 ntTSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Lppos-201ENSMUST00000181640 1603 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 CT010514.1-201ENSMUST00000214088 2969 ntBASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Cdhr3-201ENSMUST00000095774 2953 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 4921525O09Rik-201ENSMUST00000220691 3270 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
Ccdc38Q8CDN8 Trim43c-201ENSMUST00000163255 1990 ntAPPRIS P2 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm19583-201ENSMUST00000202993 1366 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Ptk6-201ENSMUST00000016511 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Tbc1d24-206ENSMUST00000168410 7683 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Phc3-210ENSMUST00000177992 2920 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm43430-201ENSMUST00000196513 3897 ntBASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Gm37855-201ENSMUST00000192571 3700 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
Ccdc38Q8CDN8 Zfp52-201ENSMUST00000079242 2175 ntAPPRIS P1 TSL 3 BASIC8.75□□□□□ -1.01
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms