Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Gm17300-201ENSMUST00000172202 1527 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Mbnl2-201ENSMUST00000088419 4552 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Zfp770-201ENSMUST00000050668 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Pfkfb3-214ENSMUST00000179584 4756 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Pknox2-207ENSMUST00000177218 3393 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm44669-201ENSMUST00000207774 1969 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Trbv14-201ENSMUST00000103272 368 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Igkv6-29-201ENSMUST00000103379 344 ntAPPRIS ALT2 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Igkv6-25-201ENSMUST00000103383 380 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm25608-201ENSMUST00000104021 132 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm13352-201ENSMUST00000117515 262 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Kxd1-203ENSMUST00000118850 992 ntTSL 2 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm11730-202ENSMUST00000147186 753 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Olfr1381-201ENSMUST00000167248 936 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm17235-201ENSMUST00000169128 964 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm17572-201ENSMUST00000171455 420 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm17711-201ENSMUST00000172028 237 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm17157-201ENSMUST00000172397 348 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm4252-201ENSMUST00000174823 313 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm18828-201ENSMUST00000180475 857 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Fendrr-201ENSMUST00000181231 1092 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm26974-202ENSMUST00000183263 930 ntTSL 2 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 2310005E17Rik-201ENSMUST00000186644 1187 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm36996-201ENSMUST00000194466 250 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm42775-201ENSMUST00000198407 740 ntTSL 3 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm8686-201ENSMUST00000203028 388 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm6308-201ENSMUST00000203226 313 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm45475-201ENSMUST00000209381 309 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm30808-201ENSMUST00000211166 845 ntTSL 5 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 5033426E14Rik-201ENSMUST00000212462 783 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 AC121569.2-201ENSMUST00000222557 574 ntTSL 2 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 CT009733.1-202ENSMUST00000224941 441 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 AC154838.2-201ENSMUST00000226602 747 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 AC101831.1-201ENSMUST00000228245 691 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Ubd-201ENSMUST00000038844 931 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Klk1b11-201ENSMUST00000007156 863 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Olfr380-201ENSMUST00000075532 936 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Snora74a-201ENSMUST00000083715 196 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm16026-201ENSMUST00000094774 580 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Trappc3l-201ENSMUST00000095758 1185 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm15433-201ENSMUST00000097671 891 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm45056-201ENSMUST00000208140 3462 ntTSL 5 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Dcaf1-201ENSMUST00000055009 4967 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Olfr332-201ENSMUST00000180165 3426 ntAPPRIS P1 TSL 2 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm42648-201ENSMUST00000200774 2505 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm16434-201ENSMUST00000100888 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm6676-201ENSMUST00000166493 2066 ntAPPRIS P5 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Olfr521-202ENSMUST00000219663 2277 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Olfr521-203ENSMUST00000220001 2254 ntAPPRIS P1 TSL 5 BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Synj2bp-204ENSMUST00000164431 3305 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Tmem232-201ENSMUST00000062161 2665 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 Gm18259-201ENSMUST00000220991 2010 ntBASIC8.36□□□□□ -1.07
Ccdc87Q8CDL9 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Golgb1-202ENSMUST00000039855 10847 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Tdrkh-202ENSMUST00000166032 5692 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 AL589871.1-201ENSMUST00000221299 3561 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Slitrk4-201ENSMUST00000069926 8494 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 A230001M10Rik-202ENSMUST00000196720 1307 ntTSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm18305-201ENSMUST00000216532 2128 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Ttc29-201ENSMUST00000049395 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm44286-201ENSMUST00000204098 1487 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Galnt5-201ENSMUST00000112616 4225 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Mup1-202ENSMUST00000103012 927 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm22426-201ENSMUST00000103811 96 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Mup16-202ENSMUST00000107483 927 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Mup17-201ENSMUST00000107484 927 ntAPPRIS P1 TSL 2 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm5915-201ENSMUST00000116136 454 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm13682-201ENSMUST00000117524 702 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm11220-201ENSMUST00000118844 475 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Cyp4a30-ps-201ENSMUST00000120813 1020 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm12517-201ENSMUST00000122082 425 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm20511-201ENSMUST00000174079 456 ntTSL 3 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm27197-201ENSMUST00000184325 479 ntTSL 3 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm5920-201ENSMUST00000187390 853 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 1700124L16Rik-203ENSMUST00000190077 1110 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm3142-201ENSMUST00000190107 414 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Mef2c-219ENSMUST00000198217 1257 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Mef2c-225ENSMUST00000199210 1185 ntTSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Gm18988-201ENSMUST00000205601 746 ntBASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
Ccdc87Q8CDL9 Vmn2r-ps91-201ENSMUST00000213039 784 ntBASIC8.35□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 89.5 ms