Protein–RNA interactions for Protein: Q6PEE2

Ctif, CBP80/20-dependent translation initiation factor, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtifQ6PEE2 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Gm45824-201ENSMUST00000212236 1004 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 AC125539.1-201ENSMUST00000227423 622 ntBASIC8.31□□□□□ -1.08
CtifQ6PEE2 Mir181c-201ENSMUST00000083549 89 ntBASIC8.31□□□□□ -1.08
CtifQ6PEE2 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Akap13-201ENSMUST00000166315 12543 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Tdrkh-204ENSMUST00000196606 2586 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Gm16973-202ENSMUST00000180752 1972 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Gm11853-201ENSMUST00000119687 1384 ntBASIC8.31□□□□□ -1.08
CtifQ6PEE2 Tspan8-203ENSMUST00000179196 1381 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Mterf4-201ENSMUST00000027492 1366 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Plch1-208ENSMUST00000160638 6271 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CtifQ6PEE2 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Hipk1-203ENSMUST00000118317 7939 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Dlg2-203ENSMUST00000107193 4910 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Cpt1a-201ENSMUST00000025835 4300 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CtifQ6PEE2 D3Ertd751e-203ENSMUST00000108065 3452 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Gm29671-201ENSMUST00000189438 2166 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Mep1b-201ENSMUST00000082235 2286 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Brox-201ENSMUST00000057062 3430 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
CtifQ6PEE2 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Klrb1c-203ENSMUST00000174404 1658 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Il15ra-217ENSMUST00000148748 1542 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Lilra6-202ENSMUST00000090689 1977 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Zfp952-201ENSMUST00000087666 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Snora17-201ENSMUST00000104004 132 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm14188-201ENSMUST00000105060 168 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 E130114P18Rik-201ENSMUST00000107067 1092 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm3618-201ENSMUST00000112726 384 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm11893-201ENSMUST00000117829 491 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 n-R5s23-201ENSMUST00000122523 115 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm15416-201ENSMUST00000131080 442 ntTSL 3 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm14250-201ENSMUST00000148458 566 ntTSL 3 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm16031-201ENSMUST00000153253 448 ntTSL 2 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm20452-201ENSMUST00000174686 513 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Mir3078-201ENSMUST00000175231 87 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm21965-201ENSMUST00000177770 384 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm5435-201ENSMUST00000179295 1150 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm11109-201ENSMUST00000180289 384 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 1810007D17Rik-201ENSMUST00000187629 742 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm29471-201ENSMUST00000190527 700 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm18797-201ENSMUST00000190809 1174 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm29372-201ENSMUST00000191416 364 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 5430433H01Rik-201ENSMUST00000193978 542 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm19211-201ENSMUST00000200251 1206 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm43934-201ENSMUST00000205095 388 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm32842-201ENSMUST00000212653 738 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 AC133947.1-201ENSMUST00000213336 614 ntTSL 3 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 AC155259.1-201ENSMUST00000214794 477 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm7239-201ENSMUST00000220981 860 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm30709-202ENSMUST00000222476 956 ntTSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Ackr1-201ENSMUST00000038227 1153 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Olfr297-201ENSMUST00000071112 933 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Olfr1231-201ENSMUST00000099786 942 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Filip1l-203ENSMUST00000159816 4452 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm42462-201ENSMUST00000196543 1363 ntBASIC8.3□□□□□ -1.08
CtifQ6PEE2 Olfr1388-202ENSMUST00000215226 3034 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Prex2-201ENSMUST00000027056 11053 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Ryr2-202ENSMUST00000170156 16813 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Ryr2-201ENSMUST00000021750 16814 ntAPPRIS P2 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm16559-201ENSMUST00000160080 1564 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Psg18-201ENSMUST00000003597 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 Serpind1-202ENSMUST00000161034 2051 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
CtifQ6PEE2 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Slc1a3-201ENSMUST00000005493 4163 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm43869-201ENSMUST00000204742 1405 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm10466-201ENSMUST00000101450 2466 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm37886-201ENSMUST00000195349 1513 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm44116-201ENSMUST00000204269 1525 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Med13l-202ENSMUST00000201010 7781 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.29□□□□□ -1.08
CtifQ6PEE2 Ncoa4-202ENSMUST00000163336 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Zmat3-201ENSMUST00000029199 7797 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
CtifQ6PEE2 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC8.29□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms