Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Mir466f-2-201ENSMUST00000104805 94 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm12656-201ENSMUST00000118149 577 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm12987-201ENSMUST00000118562 489 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm12178-201ENSMUST00000120545 330 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm12319-201ENSMUST00000131642 357 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm12594-201ENSMUST00000132140 499 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx4Q07424 E330017L17Rik-204ENSMUST00000145196 876 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm12600-201ENSMUST00000146704 708 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm12227-201ENSMUST00000147847 563 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Olfr1038-ps-201ENSMUST00000149775 1209 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Btf3-205ENSMUST00000152704 888 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 1700034H15Rik-205ENSMUST00000154116 926 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Ang-ps1-201ENSMUST00000162314 436 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Olfr772-201ENSMUST00000169800 1004 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Peak1os-201ENSMUST00000181444 1264 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Anks1b-209ENSMUST00000182083 416 ntTSL 2 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm29577-201ENSMUST00000186427 693 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm37282-201ENSMUST00000191987 164 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm38226-201ENSMUST00000192207 521 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm37665-201ENSMUST00000192353 149 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm38242-201ENSMUST00000192354 430 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm37355-201ENSMUST00000193345 606 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm43835-201ENSMUST00000195932 149 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm43535-201ENSMUST00000197846 164 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Tmigd3-206ENSMUST00000199977 838 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm8686-201ENSMUST00000203028 388 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm35216-201ENSMUST00000203777 433 ntTSL 2 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Ndufa4-203ENSMUST00000204084 409 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm44379-201ENSMUST00000204501 164 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm44268-201ENSMUST00000204814 164 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 AC133948.1-201ENSMUST00000214867 599 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.21□□□□□ -1.42
Cdx4Q07424 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx4Q07424 9530020I12Rik-202ENSMUST00000218368 1235 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Tssk4-206ENSMUST00000228041 1217 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Ghrh-201ENSMUST00000029172 516 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Pudp-201ENSMUST00000056460 1044 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Fam136b-ps-201ENSMUST00000068987 412 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Scn8a-202ENSMUST00000096198 1072 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Defa29-201ENSMUST00000098890 508 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm26561-201ENSMUST00000180743 1413 ntTSL 5 BASIC6.21□□□□□ -1.42
Cdx4Q07424 AC121942.3-201ENSMUST00000225768 1436 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Sp100-210ENSMUST00000147552 1597 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Rtp4-201ENSMUST00000038423 1573 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Zfp961-201ENSMUST00000109997 2713 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Bbs9-210ENSMUST00000147712 3495 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Taf1-206ENSMUST00000149274 5954 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Cdx4Q07424 AC158605.4-201ENSMUST00000219013 3361 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 AC099612.1-201ENSMUST00000226318 1636 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Scaper-201ENSMUST00000037408 5158 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.42
Cdx4Q07424 Zfp82-207ENSMUST00000183190 1906 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Zfp819-201ENSMUST00000032661 2362 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Zfp472-201ENSMUST00000039132 2376 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 Gm6418-201ENSMUST00000118325 3577 ntBASIC6.21□□□□□ -1.42
Cdx4Q07424 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Cdx4Q07424 B130021K23Rik-201ENSMUST00000205226 2593 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Vmn2r96-202ENSMUST00000177244 1995 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm38339-201ENSMUST00000195479 1829 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 AC113304.1-201ENSMUST00000214014 1833 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm9105-201ENSMUST00000120160 1398 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 B230364G03Rik-201ENSMUST00000181479 1374 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx4Q07424 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx4Q07424 Cfl2-201ENSMUST00000078124 2940 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx4Q07424 1700034I23Rik-201ENSMUST00000099123 2348 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cdx4Q07424 AC131743.4-201ENSMUST00000221638 1553 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Sla-205ENSMUST00000168589 1412 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx4Q07424 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx4Q07424 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx4Q07424 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Cd68-202ENSMUST00000108654 1008 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Tmsb15b1-201ENSMUST00000113071 439 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm15154-201ENSMUST00000117590 366 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm9506-201ENSMUST00000118516 320 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Pogk-201ENSMUST00000127596 769 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Rpl21-ps8-201ENSMUST00000130005 478 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Defa-ps3-201ENSMUST00000142705 282 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Mir5623-201ENSMUST00000176631 70 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 2610020F03Rik-201ENSMUST00000180401 588 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Cdx4Q07424 Mir7060-201ENSMUST00000183486 137 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Mir6415-201ENSMUST00000184064 100 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm29538-201ENSMUST00000190783 471 ntTSL 2 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm36966-201ENSMUST00000192217 413 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm37490-201ENSMUST00000195566 724 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Trav22-201ENSMUST00000198117 346 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm18988-201ENSMUST00000205601 746 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm45475-201ENSMUST00000209381 309 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm45756-201ENSMUST00000212491 407 ntBASIC6.2□□□□□ -1.42
Cdx4Q07424 Thy1-204ENSMUST00000214627 446 ntTSL 3 BASIC6.2□□□□□ -1.42
Cdx4Q07424 Gm21089-201ENSMUST00000215843 325 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms