Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Prkrip1-204ENSMUST00000151786 3893 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 2700046A07Rik-202ENSMUST00000067450 2101 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Olfr704-201ENSMUST00000080925 2124 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 BC018473-201ENSMUST00000132056 1331 ntTSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm8836-201ENSMUST00000198196 1348 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm44562-201ENSMUST00000207194 1347 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Glrx-204ENSMUST00000223120 1333 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm37842-201ENSMUST00000192330 1569 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm37829-201ENSMUST00000193864 2213 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 AC113304.1-201ENSMUST00000214014 1833 ntTSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Hbp1-202ENSMUST00000172314 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Cd200-201ENSMUST00000023341 2085 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 AI182371-206ENSMUST00000226631 1680 ntAPPRIS ALT2 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Ect2l-205ENSMUST00000209178 2586 ntTSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm36251-201ENSMUST00000213712 1914 ntTSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Stxbp5l-205ENSMUST00000114782 3996 ntAPPRIS ALT2 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Olfr718-ps1-201ENSMUST00000164536 3962 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Igkv4-80-201ENSMUST00000103341 348 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Ighj1-201ENSMUST00000103430 53 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm25546-201ENSMUST00000103977 132 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm24869-201ENSMUST00000104072 128 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Armt1-202ENSMUST00000117489 680 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Vps29-202ENSMUST00000117868 720 ntTSL 2 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm12983-201ENSMUST00000120974 310 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm23117-201ENSMUST00000158482 108 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Clec2i-205ENSMUST00000162666 1091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm2866-201ENSMUST00000166053 481 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm17074-201ENSMUST00000167284 556 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Polr2k-202ENSMUST00000180159 489 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm26817-201ENSMUST00000180446 339 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm26590-201ENSMUST00000180857 1277 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm8529-201ENSMUST00000183298 745 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm29371-201ENSMUST00000186823 885 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm28917-201ENSMUST00000187294 237 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm28622-201ENSMUST00000189842 507 ntTSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm29517-201ENSMUST00000190744 351 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm19086-201ENSMUST00000190772 665 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm18547-201ENSMUST00000192439 811 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 4930474B08Rik-201ENSMUST00000194161 837 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm17977-201ENSMUST00000198743 574 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm43136-201ENSMUST00000200403 636 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm43461-201ENSMUST00000202351 996 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 E230032D23Rik-202ENSMUST00000207959 451 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm44743-201ENSMUST00000209062 386 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 1700014L14Rik-201ENSMUST00000211704 481 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 AC164629.1-201ENSMUST00000220250 1113 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Tbca-204ENSMUST00000220825 497 ntTSL 3 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Sbpl-201ENSMUST00000024939 870 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Man2b1-201ENSMUST00000034121 3822 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm24411-201ENSMUST00000083428 131 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm42597-201ENSMUST00000196663 1544 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Ace2-201ENSMUST00000073973 3422 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm8159-202ENSMUST00000170546 1759 ntAPPRIS P5 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm14258-201ENSMUST00000144607 2031 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Thsd1-203ENSMUST00000162447 3273 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Ncaph2-202ENSMUST00000074552 3299 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Fut10-203ENSMUST00000161502 3527 ntAPPRIS P3 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Fam129a-205ENSMUST00000148810 6531 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Pex5l-205ENSMUST00000108225 3109 ntAPPRIS P3 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Tro-207ENSMUST00000163969 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 4930578I07Rik-201ENSMUST00000193416 1372 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Mgat5-202ENSMUST00000171405 3216 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Slc5a6-205ENSMUST00000202520 3248 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm16026-206ENSMUST00000163068 2741 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Tnfaip6-201ENSMUST00000065927 1710 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Nrip1-202ENSMUST00000121927 7868 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Gm12378-201ENSMUST00000116171 1461 ntBASIC7.04□□□□□ -1.28
Col8a1Q00780 Olfr1564-203ENSMUST00000213642 5271 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Olfr1564-205ENSMUST00000215450 5281 ntAPPRIS ALT1 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 D830032E09Rik-203ENSMUST00000189845 2092 ntTSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Olfr557-202ENSMUST00000215423 2680 ntAPPRIS P1 TSL 5 BASIC7.04□□□□□ -1.28
Col8a1Q00780 Ebf2-201ENSMUST00000022637 4352 ntAPPRIS P1 TSL 1 (best) BASIC7.04□□□□□ -1.28
Col8a1Q00780 Ablim1-205ENSMUST00000111526 2164 ntTSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Ppargc1a-205ENSMUST00000196968 2754 ntTSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Nek10-203ENSMUST00000112631 3386 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Olfr197-202ENSMUST00000207772 1320 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gria3-201ENSMUST00000076349 5192 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Foxp3-203ENSMUST00000115739 3739 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Ano3-201ENSMUST00000099623 6705 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Prickle2-204ENSMUST00000113447 7679 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Kng2-202ENSMUST00000100046 2294 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm37366-201ENSMUST00000194487 2297 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Col8a1Q00780 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Ttc5-202ENSMUST00000226768 2366 ntBASIC7.03□□□□□ -1.28
Col8a1Q00780 Smpd4-201ENSMUST00000006053 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Col8a1Q00780 Gm37069-201ENSMUST00000192742 4142 ntBASIC7.03□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms