Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm37490-201ENSMUST00000195566 724 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm43607-201ENSMUST00000199524 336 ntTSL 3 BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC8.9□□□□□ -0.98
Hmgb1P63158 Tmem156-205ENSMUST00000212194 956 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.98
Hmgb1P63158 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC8.9□□□□□ -0.98
Hmgb1P63158 Olfr960-203ENSMUST00000216584 1148 ntAPPRIS ALT2 TSL 3 BASIC8.9□□□□□ -0.98
Hmgb1P63158 AC134917.3-201ENSMUST00000222057 1283 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 AC124736.1-201ENSMUST00000226382 419 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC8.9□□□□□ -0.98
Hmgb1P63158 Dnah9-201ENSMUST00000080665 13798 ntAPPRIS P1 TSL 5 BASIC8.9□□□□□ -0.98
Hmgb1P63158 Zfp870-202ENSMUST00000228075 5222 ntAPPRIS P1 BASIC8.9□□□□□ -0.98
Hmgb1P63158 4930453H23Rik-201ENSMUST00000125569 1719 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gm42972-201ENSMUST00000196937 5617 ntBASIC8.9□□□□□ -0.98
Hmgb1P63158 Met-201ENSMUST00000080469 4140 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Mmp27-201ENSMUST00000120900 1662 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Hmgb1P63158 Gas2l3-201ENSMUST00000099374 6748 ntAPPRIS P2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Hmgb1P63158 Sh3kbp1-205ENSMUST00000112453 2515 ntTSL 5 BASIC8.9□□□□□ -0.99
Hmgb1P63158 AU015836-202ENSMUST00000121565 2997 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Hmgb1P63158 0610037L13Rik-212ENSMUST00000135454 2997 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Hmgb1P63158 C5ar2-201ENSMUST00000098792 3429 ntAPPRIS P5 TSL 1 (best) BASIC8.9□□□□□ -0.99
Hmgb1P63158 Gm37956-201ENSMUST00000195208 2010 ntBASIC8.9□□□□□ -0.99
Hmgb1P63158 Morf4l2-214ENSMUST00000166930 1926 ntAPPRIS P1 TSL 3 BASIC8.9□□□□□ -0.99
Hmgb1P63158 Gm28938-201ENSMUST00000187029 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm29399-202ENSMUST00000187292 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm29203-201ENSMUST00000187355 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm29027-202ENSMUST00000187571 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm28249-203ENSMUST00000190011 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm30045-202ENSMUST00000193438 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm32181-202ENSMUST00000194268 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm36345-202ENSMUST00000194949 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm31422-203ENSMUST00000195198 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm30705-203ENSMUST00000195660 1495 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 C87977-202ENSMUST00000105754 1407 ntAPPRIS ALT2 TSL 3 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm17027-201ENSMUST00000171202 1403 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Rufy3-207ENSMUST00000199312 2182 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Zfp111-203ENSMUST00000086006 6402 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Tex21-201ENSMUST00000021453 2137 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Olfr1347-202ENSMUST00000207339 1737 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm43766-201ENSMUST00000200590 5417 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm22760-201ENSMUST00000102277 93 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm10651-201ENSMUST00000118212 609 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm13499-201ENSMUST00000142804 603 ntTSL 3 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm43518-201ENSMUST00000166129 650 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm6871-204ENSMUST00000171059 462 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm44-201ENSMUST00000172155 993 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Mir5623-201ENSMUST00000176631 70 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Fundc1-205ENSMUST00000177213 1032 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm42760-201ENSMUST00000199814 311 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm43461-201ENSMUST00000202351 996 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm18973-201ENSMUST00000205814 511 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm44674-201ENSMUST00000206159 415 ntTSL 3 BASIC8.89□□□□□ -0.99
Hmgb1P63158 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.89□□□□□ -0.99
Hmgb1P63158 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm3011-201ENSMUST00000215669 582 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 AC153937.3-201ENSMUST00000217814 706 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm19810-201ENSMUST00000218521 251 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm18510-201ENSMUST00000219335 1096 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 AC112259.1-201ENSMUST00000222891 853 ntTSL 2 BASIC8.89□□□□□ -0.99
Hmgb1P63158 AV026068-220ENSMUST00000224153 1147 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Uchl4-201ENSMUST00000039011 1162 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Desi2-202ENSMUST00000069568 1193 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm10354-201ENSMUST00000096953 1215 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Olfr1270-201ENSMUST00000099754 1018 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm33533-201ENSMUST00000193853 1633 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Tdgf1-201ENSMUST00000035075 1932 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Dph5-201ENSMUST00000043342 1576 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm43425-201ENSMUST00000201793 3291 ntBASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm17034-201ENSMUST00000168990 2229 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Ceacam20-201ENSMUST00000094753 2888 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Zfp37-201ENSMUST00000068822 3494 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Hmgb1P63158 Dhcr7-207ENSMUST00000141916 2752 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Olfr455-202ENSMUST00000217978 4054 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Olfr54-203ENSMUST00000217480 5048 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC8.89□□□□□ -0.99
Hmgb1P63158 Gm42609-201ENSMUST00000196362 3306 ntTSL 2 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Hook3-201ENSMUST00000037182 12836 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Slc12a6-202ENSMUST00000053666 6060 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Hmgb1P63158 Magea5-201ENSMUST00000069556 1360 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Slc22a8-202ENSMUST00000170817 3398 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Supt20-203ENSMUST00000197502 2751 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Hmgb1P63158 Gm43254-201ENSMUST00000199187 2491 ntBASIC8.88□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms