Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Mak-206ENSMUST00000225084 3573 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
VhlP40338 4930456G14Rik-201ENSMUST00000193054 1330 ntBASIC6.41□□□□□ -1.38
VhlP40338 AC125487.1-201ENSMUST00000217888 1300 ntBASIC6.41□□□□□ -1.38
VhlP40338 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VhlP40338 Asph-209ENSMUST00000108335 2514 ntTSL 5 BASIC6.41□□□□□ -1.38
VhlP40338 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
VhlP40338 Gm28515-201ENSMUST00000189823 2530 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VhlP40338 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC6.41□□□□□ -1.38
VhlP40338 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
VhlP40338 Gimap4-202ENSMUST00000090070 1804 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
VhlP40338 F13a1-202ENSMUST00000164727 3854 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VhlP40338 Cul5-202ENSMUST00000120122 5945 ntTSL 5 BASIC6.41□□□□□ -1.38
VhlP40338 Celf2-214ENSMUST00000170438 8856 ntTSL 5 BASIC6.41□□□□□ -1.38
VhlP40338 Tcf7l2-210ENSMUST00000111657 4126 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Cd247-208ENSMUST00000178336 2807 ntTSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Fbxw10-205ENSMUST00000176577 3254 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Adcy10-203ENSMUST00000111440 5078 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Kcnmb2-204ENSMUST00000191869 1552 ntTSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Gm37510-201ENSMUST00000194151 4762 ntBASIC6.4□□□□□ -1.38
VhlP40338 Nasp-201ENSMUST00000030456 2520 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 9330182O14Rik-202ENSMUST00000228780 2053 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VhlP40338 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Gm42996-201ENSMUST00000196116 1636 ntBASIC6.4□□□□□ -1.38
VhlP40338 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Ifit3-201ENSMUST00000102825 1745 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Grik1-210ENSMUST00000228034 2708 ntBASIC6.4□□□□□ -1.38
VhlP40338 Zbed4-ps3-201ENSMUST00000187149 3244 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm13881-201ENSMUST00000149025 3716 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Klf8-202ENSMUST00000112574 4752 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Gm25095-201ENSMUST00000104047 131 ntBASIC6.4□□□□□ -1.38
VhlP40338 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm14630-201ENSMUST00000118057 246 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm12955-201ENSMUST00000119689 957 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm12780-201ENSMUST00000122458 645 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm11464-201ENSMUST00000146963 537 ntTSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Gm8868-201ENSMUST00000173591 577 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm27043-201ENSMUST00000182807 958 ntBASIC6.4□□□□□ -1.38
VhlP40338 5830468F06Rik-201ENSMUST00000184288 1104 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Arhgap26-218ENSMUST00000187912 312 ntTSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Gm7369-201ENSMUST00000192738 936 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm42667-201ENSMUST00000196132 234 ntBASIC6.4□□□□□ -1.38
VhlP40338 1700113A16Rik-202ENSMUST00000197172 776 ntTSL 2 BASIC6.4□□□□□ -1.38
VhlP40338 Kmt5a-212ENSMUST00000198451 1032 ntTSL 3 BASIC6.4□□□□□ -1.38
VhlP40338 Gm17977-201ENSMUST00000198743 574 ntBASIC6.4□□□□□ -1.38
VhlP40338 Olfr1389-201ENSMUST00000203369 1073 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
VhlP40338 Rpl18a-ps4-201ENSMUST00000206176 536 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm8489-201ENSMUST00000209876 1152 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm45274-201ENSMUST00000209938 647 ntTSL 3 BASIC6.4□□□□□ -1.38
VhlP40338 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Gm32710-201ENSMUST00000210677 618 ntTSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Gm45795-201ENSMUST00000211847 400 ntBASIC6.4□□□□□ -1.38
VhlP40338 CT025685.1-201ENSMUST00000213716 150 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gm39307-201ENSMUST00000216780 1037 ntTSL 5 BASIC6.4□□□□□ -1.38
VhlP40338 Gm18362-201ENSMUST00000221786 529 ntBASIC6.4□□□□□ -1.38
VhlP40338 Gnpnat1-202ENSMUST00000226276 710 ntBASIC6.4□□□□□ -1.38
VhlP40338 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
VhlP40338 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Gm28055-202ENSMUST00000189576 1301 ntTSL 3 BASIC6.4□□□□□ -1.39
VhlP40338 Grik1-209ENSMUST00000227986 2942 ntBASIC6.4□□□□□ -1.39
VhlP40338 Slc22a8-201ENSMUST00000010251 3478 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Gm37783-201ENSMUST00000192025 1856 ntBASIC6.4□□□□□ -1.39
VhlP40338 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.4□□□□□ -1.39
VhlP40338 Lix1-201ENSMUST00000115576 3116 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Olfr1199-203ENSMUST00000131038 2557 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.39
VhlP40338 6720489N17Rik-203ENSMUST00000223338 1457 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.39
VhlP40338 Gm43181-201ENSMUST00000197001 2072 ntBASIC6.4□□□□□ -1.39
VhlP40338 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.4□□□□□ -1.39
VhlP40338 Gm36694-201ENSMUST00000205855 2719 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Gm43196-201ENSMUST00000201762 2114 ntBASIC6.4□□□□□ -1.39
VhlP40338 Paip1-202ENSMUST00000109203 1525 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
VhlP40338 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Ggta1-205ENSMUST00000113002 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Ociad1-203ENSMUST00000166823 3354 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Gen1-201ENSMUST00000166117 5268 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
VhlP40338 Patj-204ENSMUST00000107029 4342 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VhlP40338 Ints2-202ENSMUST00000108039 4369 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
VhlP40338 Nt5c1b-220ENSMUST00000223534 1798 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VhlP40338 AC132467.1-201ENSMUST00000226498 1845 ntBASIC6.39□□□□□ -1.39
VhlP40338 Senp6-203ENSMUST00000165607 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
VhlP40338 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.39□□□□□ -1.39
VhlP40338 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VhlP40338 Unc80-206ENSMUST00000212557 9777 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
VhlP40338 AC156645.1-201ENSMUST00000223066 5194 ntBASIC6.39□□□□□ -1.39
VhlP40338 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
VhlP40338 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
VhlP40338 Gm26209-201ENSMUST00000103852 110 ntBASIC6.39□□□□□ -1.39
VhlP40338 Dnhd1-201ENSMUST00000106776 1146 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
VhlP40338 Swi5-202ENSMUST00000113395 712 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
VhlP40338 Gm14682-201ENSMUST00000117977 524 ntBASIC6.39□□□□□ -1.39
VhlP40338 Ccdc50-ps-201ENSMUST00000118044 941 ntBASIC6.39□□□□□ -1.39
VhlP40338 Gm11922-201ENSMUST00000118967 475 ntBASIC6.39□□□□□ -1.39
VhlP40338 Gm9434-201ENSMUST00000118975 813 ntBASIC6.39□□□□□ -1.39
VhlP40338 Gm12844-201ENSMUST00000119463 582 ntBASIC6.39□□□□□ -1.39
VhlP40338 Gm11676-201ENSMUST00000120443 490 ntBASIC6.39□□□□□ -1.39
VhlP40338 Gm5389-201ENSMUST00000120893 1176 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms