Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm9458-201ENSMUST00000135273 727 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm15637-201ENSMUST00000135544 817 ntTSL 3 BASIC7.67□□□□□ -1.18
BdnfP21237 Arhgef38-204ENSMUST00000161932 1033 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC7.67□□□□□ -1.18
BdnfP21237 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm23403-201ENSMUST00000179169 110 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm19402-201ENSMUST00000180297 801 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm7456-201ENSMUST00000182862 1011 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Pea15b-202ENSMUST00000183185 555 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm27651-201ENSMUST00000183465 246 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm27403-201ENSMUST00000184662 214 ntBASIC7.67□□□□□ -1.18
BdnfP21237 1700095A13Rik-201ENSMUST00000185460 711 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Gm29354-201ENSMUST00000187613 696 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Il19-204ENSMUST00000187916 720 ntTSL 2 BASIC7.67□□□□□ -1.18
BdnfP21237 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm29068-201ENSMUST00000191607 400 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm37901-201ENSMUST00000195107 514 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm37904-201ENSMUST00000195591 312 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm42698-201ENSMUST00000197790 762 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm43936-201ENSMUST00000203987 490 ntTSL 5 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm44721-201ENSMUST00000206978 472 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Lyrm1-207ENSMUST00000208202 936 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
BdnfP21237 4933407I05Rik-201ENSMUST00000213311 482 ntTSL 5 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm31378-201ENSMUST00000213538 267 ntTSL 5 BASIC7.67□□□□□ -1.18
BdnfP21237 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Gm46210-201ENSMUST00000218800 577 ntTSL 3 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm19073-201ENSMUST00000219978 555 ntBASIC7.67□□□□□ -1.18
BdnfP21237 AC123738.1-201ENSMUST00000224796 773 ntBASIC7.67□□□□□ -1.18
BdnfP21237 AC160109.1-201ENSMUST00000225592 729 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Psors1c2-201ENSMUST00000025273 843 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC7.67□□□□□ -1.18
BdnfP21237 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
BdnfP21237 Cenpx-202ENSMUST00000055424 606 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Tarm1-201ENSMUST00000065703 892 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Folr2-201ENSMUST00000094141 1067 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Rpl21-ps5-201ENSMUST00000095940 483 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Olfr659-201ENSMUST00000098170 969 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
BdnfP21237 Olfr555-201ENSMUST00000098220 948 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
BdnfP21237 Olfr73-201ENSMUST00000099838 942 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
BdnfP21237 Cdkal1-201ENSMUST00000006353 2629 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Prkaa1-202ENSMUST00000228218 4618 ntBASIC7.67□□□□□ -1.18
BdnfP21237 CT009604.1-201ENSMUST00000223900 1328 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Gm13619-201ENSMUST00000155722 2138 ntTSL 2 BASIC7.67□□□□□ -1.18
BdnfP21237 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm43534-201ENSMUST00000197685 2853 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Ralgapa1-212ENSMUST00000226244 8841 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Ankfn1-203ENSMUST00000169201 2232 ntTSL 2 BASIC7.67□□□□□ -1.18
BdnfP21237 Exd1-203ENSMUST00000171024 5290 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Gm15999-201ENSMUST00000127317 1511 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Gm7364-201ENSMUST00000188760 1501 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm42520-201ENSMUST00000199642 1502 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
BdnfP21237 Gm12919-201ENSMUST00000119855 1594 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Gm45210-201ENSMUST00000206401 1577 ntBASIC7.67□□□□□ -1.18
BdnfP21237 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.67□□□□□ -1.18
BdnfP21237 Hipk2-205ENSMUST00000160962 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Slc6a18-203ENSMUST00000109680 4052 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Ctps2-202ENSMUST00000101095 1665 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Tgfb3-201ENSMUST00000003687 3383 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
BdnfP21237 Gm9752-201ENSMUST00000048965 2659 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Myh10-202ENSMUST00000092984 7759 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Gm20362-201ENSMUST00000204808 2072 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Gm28720-201ENSMUST00000190728 3156 ntBASIC7.66□□□□□ -1.18
BdnfP21237 Frem3-201ENSMUST00000039695 6384 ntAPPRIS P1 TSL 5 BASIC7.66□□□□□ -1.18
BdnfP21237 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC7.66□□□□□ -1.18
BdnfP21237 Plau-201ENSMUST00000022368 2342 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Olfr1426-202ENSMUST00000208703 2546 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
BdnfP21237 n-R5s90-201ENSMUST00000103968 118 ntBASIC7.66□□□□□ -1.18
BdnfP21237 Inca1-204ENSMUST00000108543 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Churc1-202ENSMUST00000110399 535 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Tmsb15a-202ENSMUST00000113154 544 ntTSL 5 BASIC7.66□□□□□ -1.18
BdnfP21237 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Gm12273-201ENSMUST00000137418 1084 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Gm14487-201ENSMUST00000145413 1259 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Gm15864-201ENSMUST00000145950 369 ntTSL 3 BASIC7.66□□□□□ -1.18
BdnfP21237 Tle6-213ENSMUST00000151858 627 ntTSL 3 BASIC7.66□□□□□ -1.18
BdnfP21237 Nhej1-201ENSMUST00000152855 1053 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Uchl1os-202ENSMUST00000177319 505 ntTSL 3 BASIC7.66□□□□□ -1.18
BdnfP21237 Gm29018-202ENSMUST00000191356 313 ntTSL 3 BASIC7.66□□□□□ -1.18
BdnfP21237 Gm5708-201ENSMUST00000196289 886 ntBASIC7.66□□□□□ -1.18
BdnfP21237 Selenok-ps7-201ENSMUST00000197069 283 ntBASIC7.66□□□□□ -1.18
BdnfP21237 Gm32921-201ENSMUST00000200592 810 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Gm3198-201ENSMUST00000208725 1026 ntBASIC7.66□□□□□ -1.18
BdnfP21237 Gm10451-202ENSMUST00000219367 855 ntTSL 2 BASIC7.66□□□□□ -1.18
BdnfP21237 Lilrb4a-215ENSMUST00000220182 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC7.66□□□□□ -1.18
BdnfP21237 AC124736.1-201ENSMUST00000226382 419 ntBASIC7.66□□□□□ -1.18
BdnfP21237 AC171241.2-201ENSMUST00000228744 892 ntBASIC7.66□□□□□ -1.18
BdnfP21237 Dapl1-201ENSMUST00000028369 573 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 9230104L09Rik-201ENSMUST00000028937 661 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
BdnfP21237 Snora65-201ENSMUST00000083190 130 ntBASIC7.66□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms