Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Abcc9-206ENSMUST00000205202 4752 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Ndrg3-201ENSMUST00000069600 2612 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Unc5c-201ENSMUST00000075282 3890 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Card11-201ENSMUST00000085786 4107 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm38056-201ENSMUST00000193928 5027 ntBASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Cnksr3-202ENSMUST00000150282 2554 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm36737-201ENSMUST00000209653 2189 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 BC016579-201ENSMUST00000036732 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Mkl2-201ENSMUST00000009713 5815 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Mir1983-201ENSMUST00000157523 132 ntBASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm20637-201ENSMUST00000175715 462 ntBASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm9127-201ENSMUST00000188041 985 ntBASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm39383-201ENSMUST00000216894 1009 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Gm29154-253ENSMUST00000217229 1207 ntTSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Cfap126-201ENSMUST00000027959 1034 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Wfdc13-201ENSMUST00000088260 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 2010111I01Rik-202ENSMUST00000091560 3509 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Ptchd4-201ENSMUST00000048691 6890 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ccdc180J3QNE4 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 H6pd-202ENSMUST00000084117 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Ptprr-201ENSMUST00000063470 3619 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 C130083A15Rik-201ENSMUST00000205707 1460 ntBASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Hsf3-201ENSMUST00000059003 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Actr10-201ENSMUST00000021479 4022 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 B230323A14Rik-201ENSMUST00000180488 2864 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Nat10-201ENSMUST00000028608 3879 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Zic4-201ENSMUST00000066384 3891 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Nolc1-203ENSMUST00000223728 3523 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Gm45708-202ENSMUST00000212785 2752 ntTSL 5 BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Atg7-202ENSMUST00000169310 3895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 9330121K16Rik-201ENSMUST00000211464 3886 ntBASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Amd-ps4-201ENSMUST00000118392 1003 ntBASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Snhg5-201ENSMUST00000180563 1004 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 AC125087.1-201ENSMUST00000227552 514 ntBASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Mgst1-201ENSMUST00000008684 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Eya3-202ENSMUST00000079157 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Inhbe-201ENSMUST00000059718 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Btbd10-202ENSMUST00000117577 2384 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 AU020206-202ENSMUST00000206358 3009 ntBASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Ccdc180J3QNE4 Wdfy3-207ENSMUST00000212024 10539 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Nrep-203ENSMUST00000171533 2156 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Sgsh-202ENSMUST00000100172 4223 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Adgrl3-204ENSMUST00000117407 5705 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Xpnpep2-201ENSMUST00000077775 3498 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 H2al2a-201ENSMUST00000105001 542 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 9630041A04Rik-201ENSMUST00000112841 974 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm13423-201ENSMUST00000117205 888 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm13486-201ENSMUST00000119910 282 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm15788-201ENSMUST00000130123 613 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm26321-201ENSMUST00000157740 242 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm43396-201ENSMUST00000197506 706 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Reg1-203ENSMUST00000204687 904 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm44931-201ENSMUST00000206056 545 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm39158-201ENSMUST00000210178 856 ntTSL 3 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 AC122397.3-201ENSMUST00000227097 527 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm23054-201ENSMUST00000082804 162 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Olfr1243-201ENSMUST00000099775 918 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm43980-201ENSMUST00000204899 1612 ntBASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Rbm28-201ENSMUST00000007993 4465 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Cep112-216ENSMUST00000182729 2850 ntTSL 5 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Phf21a-207ENSMUST00000111293 3900 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Acod1-201ENSMUST00000022722 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Cyp4a30b-201ENSMUST00000119958 1527 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Ehmt1-201ENSMUST00000046227 4554 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Pxmp4-201ENSMUST00000000896 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Gm11872-201ENSMUST00000141819 2219 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Ccdc180J3QNE4 Cts7-203ENSMUST00000224986 1349 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Adam18-201ENSMUST00000033957 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Ppp4r1l-ps-205ENSMUST00000141051 4466 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm37863-201ENSMUST00000194911 1457 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Rasgef1b-210ENSMUST00000209346 3028 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Rhox3c-201ENSMUST00000115188 1053 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm11903-201ENSMUST00000118958 727 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm11371-201ENSMUST00000120294 385 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm2735-201ENSMUST00000136133 277 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm16540-201ENSMUST00000160263 426 ntTSL 5 BASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm6434-201ENSMUST00000163316 372 ntBASIC14.11□□□□□ -0.15
Ccdc180J3QNE4 Gm2619-202ENSMUST00000166777 651 ntBASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 393.5 ms