Protein–RNA interactions for Protein: Q9DB34

Chmp2a, Charged multivesicular body protein 2a, mousemouse

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2aQ9DB34 Avpr1b-202ENSMUST00000190410 623 ntTSL 5 BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Scp2-ps1-201ENSMUST00000193152 499 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Gm37185-201ENSMUST00000193852 410 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 4930471M09Rik-202ENSMUST00000206475 1990 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 9530078K11Rik-201ENSMUST00000208883 694 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Olfr471-201ENSMUST00000210091 936 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Gm33103-201ENSMUST00000212717 527 ntTSL 3 BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Srp54a-201ENSMUST00000021407 1515 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 AC165349.2-201ENSMUST00000219097 426 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 AC156645.1-201ENSMUST00000223066 5194 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 AC124397.1-201ENSMUST00000224296 653 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Ift81-201ENSMUST00000031426 2950 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Rpsa-ps2-201ENSMUST00000059546 880 ntBASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Lcn11-201ENSMUST00000091278 652 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Sox5-214ENSMUST00000170367 7184 ntTSL 5 BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Zfp641-202ENSMUST00000169721 3673 ntAPPRIS P2 TSL 1 (best) BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Rgs4-202ENSMUST00000111357 2575 ntTSL 5 BASIC8.16□□□□□ -1.1
Chmp2aQ9DB34 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Olfr650-ps1-201ENSMUST00000121432 2321 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm7972-203ENSMUST00000209180 2184 ntTSL 3 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Lsmem1-202ENSMUST00000220951 2152 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Zfp474-202ENSMUST00000209270 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Smc1b-201ENSMUST00000023068 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Tbc1d15-201ENSMUST00000020339 3752 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Xrn2-201ENSMUST00000028921 3434 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Zfp661-202ENSMUST00000110366 4912 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Pan2-203ENSMUST00000218315 4379 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Nprl2-201ENSMUST00000010201 1441 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 4930503L19Rik-207ENSMUST00000212982 1415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm42576-201ENSMUST00000202336 2846 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Nsun2-201ENSMUST00000022087 4164 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm7647-201ENSMUST00000200996 1389 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Mms19-217ENSMUST00000171561 6607 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm7785-201ENSMUST00000117121 892 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm5931-201ENSMUST00000121308 477 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Samd13-201ENSMUST00000124931 905 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm23663-201ENSMUST00000158045 80 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Ankrd55-204ENSMUST00000168684 1005 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm7031-201ENSMUST00000173709 919 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Ly6c2-204ENSMUST00000191451 538 ntAPPRIS P1 TSL 2 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Mllt11-202ENSMUST00000196025 624 ntAPPRIS P1 TSL 3 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm43471-201ENSMUST00000197550 467 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm43479-201ENSMUST00000200801 529 ntTSL 2 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 9530013L04Rik-201ENSMUST00000203393 782 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm17995-201ENSMUST00000209266 530 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm33096-201ENSMUST00000210189 493 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 AC160635.1-201ENSMUST00000216731 474 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 AC121788.2-201ENSMUST00000218284 1255 ntTSL 5 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 AC163041.2-201ENSMUST00000223082 573 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 CT030170.6-202ENSMUST00000223186 544 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 AC124715.2-201ENSMUST00000226762 617 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm16391-201ENSMUST00000086601 447 ntBASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm10697-201ENSMUST00000091692 1023 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Olfr2-201ENSMUST00000094109 1250 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Tdpoz5-201ENSMUST00000098879 1023 ntAPPRIS P1 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Fam217a-201ENSMUST00000021851 2402 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Tcp10a-201ENSMUST00000095726 2442 ntAPPRIS P2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Nr3c1-202ENSMUST00000097592 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm26939-201ENSMUST00000177146 2261 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Musk-208ENSMUST00000179951 3376 ntTSL 5 BASIC8.15□□□□□ -1.1
Chmp2aQ9DB34 Gm31614-201ENSMUST00000215504 3231 ntTSL 5 BASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 Gm30400-202ENSMUST00000210562 2115 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 Rufy3-201ENSMUST00000031229 4049 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 Pax5-201ENSMUST00000014174 8004 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 Muc5ac-202ENSMUST00000155534 10752 ntAPPRIS ALT2 TSL 5 BASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 Sorbs1-202ENSMUST00000099467 2817 ntAPPRIS P4 TSL 5 BASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 Gm4673-201ENSMUST00000181395 3660 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 Mtrf1-201ENSMUST00000022600 1799 ntAPPRIS P1 TSL 1 (best) BASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 Gm42847-201ENSMUST00000201732 2553 ntBASIC8.15□□□□□ -1.11
Chmp2aQ9DB34 3110035E14Rik-201ENSMUST00000088666 3256 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 2310058D17Rik-201ENSMUST00000131221 3201 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Pcdh17-201ENSMUST00000071370 11451 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Cts7-201ENSMUST00000021892 1518 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 C130093G08Rik-201ENSMUST00000202489 2226 ntBASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Fgfbp1-202ENSMUST00000199481 2191 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 A730085K08Rik-201ENSMUST00000177015 2013 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Lyz2-201ENSMUST00000092163 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Mgam-202ENSMUST00000201148 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Mgam-201ENSMUST00000071535 6488 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Gm37170-201ENSMUST00000194488 1934 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Platr30-202ENSMUST00000199348 1934 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Gm14036-201ENSMUST00000118248 480 ntBASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Gm11922-201ENSMUST00000118967 475 ntBASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Gm12993-201ENSMUST00000119900 479 ntBASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Gm15836-201ENSMUST00000119952 793 ntBASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 Gm15192-201ENSMUST00000121005 293 ntBASIC8.14□□□□□ -1.11
Chmp2aQ9DB34 1700123O12Rik-202ENSMUST00000141312 660 ntTSL 3 BASIC8.14□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms