Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Gm45795-201ENSMUST00000211847 400 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm7727-201ENSMUST00000219830 671 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 1700104L18Rik-201ENSMUST00000220132 598 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Thyn1-201ENSMUST00000039161 918 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Krtap7-1-201ENSMUST00000056118 620 ntAPPRIS P1 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm22748-201ENSMUST00000082493 136 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm26132-201ENSMUST00000083166 148 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Dph6-202ENSMUST00000055144 2476 ntTSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gria3-209ENSMUST00000165288 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Ncald-203ENSMUST00000119730 3295 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Angpt2-201ENSMUST00000033846 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Large1-201ENSMUST00000004497 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Ccr4-201ENSMUST00000054414 2805 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Tmem161b-206ENSMUST00000225069 2414 ntBASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Olfr1006-201ENSMUST00000099917 1529 ntAPPRIS P1 TSL 2 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC8.8□□□□□ -1
Ccdc38Q8CDN8 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Nxpe4-201ENSMUST00000093853 3173 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gprin3-201ENSMUST00000051065 8339 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Atp8a1-207ENSMUST00000135930 8069 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 2610028E06Rik-205ENSMUST00000156350 3623 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Hdhd2-209ENSMUST00000150990 3126 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm28497-201ENSMUST00000189646 3029 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm44834-201ENSMUST00000206671 1396 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Prl8a6-203ENSMUST00000110355 843 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm14528-201ENSMUST00000120615 231 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm12870-201ENSMUST00000121383 1016 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Ttc9c-204ENSMUST00000153281 1192 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm8813-201ENSMUST00000155930 595 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm23533-201ENSMUST00000157540 245 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Vmn2r-ps81-201ENSMUST00000172519 838 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 4933400F21Rik-201ENSMUST00000186098 1007 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm2087-201ENSMUST00000188217 366 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm29041-201ENSMUST00000189199 380 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Spam1-203ENSMUST00000202569 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm34701-201ENSMUST00000204213 849 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm8952-201ENSMUST00000206828 1102 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Olfr1422-ps1-201ENSMUST00000208076 743 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Olfr209-204ENSMUST00000213779 564 ntTSL 5 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 2310003N18Rik-201ENSMUST00000215655 458 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 AC142114.1-201ENSMUST00000227724 328 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 AC122877.1-201ENSMUST00000228873 218 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Prl8a6-202ENSMUST00000080762 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Musk-203ENSMUST00000098057 3422 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Olfr97-206ENSMUST00000216225 1847 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gin1-201ENSMUST00000027571 2494 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Aspa-206ENSMUST00000184572 1746 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 A530058O07Rik-201ENSMUST00000222059 3364 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Araf-202ENSMUST00000120356 1520 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Cnr1-202ENSMUST00000084736 5761 ntAPPRIS P1 TSL 2 BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm39526-201ENSMUST00000208925 1413 ntTSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Kcnd2-201ENSMUST00000081542 5152 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Gm37199-201ENSMUST00000193881 4065 ntBASIC8.79□□□□□ -1
Ccdc38Q8CDN8 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Ccdc38Q8CDN8 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Mmaa-201ENSMUST00000048718 5650 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm43161-201ENSMUST00000197020 1688 ntBASIC8.78□□□□□ -1
Ccdc38Q8CDN8 EU599041-203ENSMUST00000205748 1492 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 AC122878.1-201ENSMUST00000227716 1460 ntBASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Ggta1-204ENSMUST00000113001 3340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm9164-201ENSMUST00000118700 1014 ntBASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm5390-201ENSMUST00000119069 1230 ntBASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Wdr61-205ENSMUST00000130368 1162 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 BC035044-202ENSMUST00000178918 466 ntAPPRIS ALT2 TSL 2 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm29290-201ENSMUST00000185385 597 ntTSL 3 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm28401-202ENSMUST00000190769 550 ntTSL 5 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm31243-202ENSMUST00000198354 628 ntTSL 3 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm43247-201ENSMUST00000198638 481 ntBASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm42884-201ENSMUST00000200729 422 ntTSL 2 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 AC167364.2-201ENSMUST00000221226 1037 ntTSL 5 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 1700001C02Rik-201ENSMUST00000031078 731 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Wdr61-201ENSMUST00000051822 1187 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Tex37-201ENSMUST00000063456 814 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Vmn1r204-201ENSMUST00000091728 909 ntAPPRIS P1 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Grxcr1-201ENSMUST00000094715 1071 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm21541-201ENSMUST00000098128 870 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Cfap57-201ENSMUST00000071972 4020 ntAPPRIS P1 TSL 5 BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm45537-201ENSMUST00000211539 2708 ntBASIC8.78□□□□□ -1
Ccdc38Q8CDN8 1700095J07Rik-201ENSMUST00000128017 1405 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Atp7a-202ENSMUST00000113557 4900 ntAPPRIS P3 TSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Gm37552-201ENSMUST00000193939 2520 ntTSL 1 (best) BASIC8.78□□□□□ -1
Ccdc38Q8CDN8 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC8.78□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 62.4 ms