Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 2310001H17Rik-202ENSMUST00000181238 2237 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 AC126806.1-201ENSMUST00000217349 3869 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Trpm6-201ENSMUST00000040489 6508 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Nin-202ENSMUST00000085314 9675 ntAPPRIS P4 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 CT010505.3-201ENSMUST00000227835 1651 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Tex28-201ENSMUST00000078060 1420 ntAPPRIS P1 TSL 5 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Ttc9c-202ENSMUST00000096751 3509 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Kntc1-201ENSMUST00000031366 6961 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Antxrl-201ENSMUST00000058725 2532 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Cntn5-204ENSMUST00000162484 3606 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Siah3-201ENSMUST00000164848 4472 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm8844-201ENSMUST00000119460 2614 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Tm4sf20-201ENSMUST00000027331 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Exoc3-201ENSMUST00000035934 4922 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm26012-201ENSMUST00000104411 128 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Aph1b-202ENSMUST00000113730 682 ntTSL 5 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm23840-201ENSMUST00000116950 97 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Pinlyp-201ENSMUST00000011776 843 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm12098-201ENSMUST00000118277 508 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm13921-201ENSMUST00000119411 463 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm11955-201ENSMUST00000119801 470 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm13586-201ENSMUST00000121784 464 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 BC021767-202ENSMUST00000136988 905 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm15339-201ENSMUST00000153577 506 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm22847-201ENSMUST00000157707 105 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm16580-201ENSMUST00000162696 1044 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm25190-201ENSMUST00000176664 95 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Six3os1-213ENSMUST00000177487 537 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Mir7060-201ENSMUST00000183486 137 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm28609-201ENSMUST00000186515 463 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm29561-201ENSMUST00000187838 631 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm29143-201ENSMUST00000189462 201 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm29168-201ENSMUST00000189953 687 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm28530-201ENSMUST00000190473 577 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm5708-201ENSMUST00000196289 886 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm43840-201ENSMUST00000199444 484 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Igkv8-22-201ENSMUST00000199501 367 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm44203-201ENSMUST00000203134 307 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm44148-201ENSMUST00000203718 316 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm26911-203ENSMUST00000204781 369 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 4833412C05Rik-202ENSMUST00000208257 850 ntTSL 3 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm2734-201ENSMUST00000208561 743 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Olfr471-201ENSMUST00000210091 936 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm35501-201ENSMUST00000213492 783 ntTSL 2 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 AC154747.2-201ENSMUST00000225109 780 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 AC124736.1-201ENSMUST00000226382 419 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Spp2-201ENSMUST00000027518 928 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Eqtn-201ENSMUST00000030309 1074 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gsta2-201ENSMUST00000034902 870 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Itih3-201ENSMUST00000006697 2992 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm8394-201ENSMUST00000079684 952 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Sept14-203ENSMUST00000182386 1642 ntAPPRIS P2 TSL 5 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Oas2-201ENSMUST00000053909 3869 ntAPPRIS P3 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Zfp473-207ENSMUST00000149011 9230 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Ccdc150-201ENSMUST00000027128 3807 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Ermard-204ENSMUST00000097395 1593 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Gm37877-201ENSMUST00000191630 2709 ntBASIC8.31□□□□□ -1.08
Trim43aQ3TL54 Zbtb26-202ENSMUST00000102789 2047 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Ephb2-202ENSMUST00000105845 10902 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Olfr1491-202ENSMUST00000214007 1675 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Olfr1491-203ENSMUST00000215493 1675 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Olfr1491-205ENSMUST00000216377 1678 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm44746-201ENSMUST00000205565 1349 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 1700011H14Rik-201ENSMUST00000022398 1349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Spag9-201ENSMUST00000024979 6756 ntTSL 5 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm45904-201ENSMUST00000213082 2330 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm44752-201ENSMUST00000207140 3305 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 9030607J07Rik-201ENSMUST00000202228 1622 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Prb1-201ENSMUST00000087853 1621 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Lrcol1-201ENSMUST00000100924 692 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm22760-201ENSMUST00000102277 93 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm24048-201ENSMUST00000102411 106 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Babam2-203ENSMUST00000114507 1143 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm5761-201ENSMUST00000119238 834 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm15028-201ENSMUST00000120295 370 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 A930104D05Rik-201ENSMUST00000128601 939 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Cul1-203ENSMUST00000143941 530 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Platr14-205ENSMUST00000146553 770 ntTSL 2 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Trav5d-4-201ENSMUST00000179701 343 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Trav5n-4-201ENSMUST00000179997 343 ntAPPRIS P1 BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm28677-202ENSMUST00000186904 615 ntBASIC8.3□□□□□ -1.08
Trim43aQ3TL54 Gm29240-201ENSMUST00000187248 286 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms