Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 A630023P12Rik-201ENSMUST00000129007 1221 ntTSL 2 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Olfr330-201ENSMUST00000134055 1134 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hmgb3O54879 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Zfp128-202ENSMUST00000144578 3834 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm6706-201ENSMUST00000145087 318 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Il21-202ENSMUST00000161015 529 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm16301-201ENSMUST00000161959 295 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm17042-201ENSMUST00000167075 1216 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm22461-201ENSMUST00000175272 70 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm4651-201ENSMUST00000181738 1283 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Mir6354-201ENSMUST00000184979 116 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm29068-201ENSMUST00000191607 400 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm43560-201ENSMUST00000198100 773 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm7384-201ENSMUST00000203682 530 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Lsm5-205ENSMUST00000203958 416 ntTSL 3 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm18973-201ENSMUST00000205814 511 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm32816-202ENSMUST00000206497 496 ntTSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm44714-201ENSMUST00000208665 657 ntTSL 3 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Bcap31-201ENSMUST00000002091 1219 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm36849-201ENSMUST00000210345 680 ntTSL 2 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Rtp4-203ENSMUST00000210901 1158 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm21941-201ENSMUST00000221121 562 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Arl15-202ENSMUST00000224068 1002 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 CT009733.1-202ENSMUST00000224941 441 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm8174-201ENSMUST00000064353 1001 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Tcl1b4-201ENSMUST00000000718 1031 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm21957-201ENSMUST00000073056 438 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Arhgap1-203ENSMUST00000111330 3068 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Ncald-204ENSMUST00000120746 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Cmah-209ENSMUST00000224953 2221 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
Hmgb3O54879 Gm5681-201ENSMUST00000189217 1533 ntBASIC6.34□□□□□ -1.39
Hmgb3O54879 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
Hmgb3O54879 Nos2-201ENSMUST00000018610 4192 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb3O54879 Olfr975-202ENSMUST00000216647 2848 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Hmgb3O54879 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.4
Hmgb3O54879 Tead1-206ENSMUST00000164363 1495 ntAPPRIS P4 TSL 5 BASIC6.34□□□□□ -1.4
Hmgb3O54879 Dnase1l3-201ENSMUST00000026315 4747 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
Hmgb3O54879 Gm3269-201ENSMUST00000166025 1758 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.4
Hmgb3O54879 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm13262-201ENSMUST00000149014 2022 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Cep85l-204ENSMUST00000220376 2339 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Rgs4-201ENSMUST00000027991 2941 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm3742-201ENSMUST00000220907 1391 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Lrrtm4-205ENSMUST00000133918 2255 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Dbhos-201ENSMUST00000150024 4020 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Platr22-201ENSMUST00000181274 1617 ntTSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 AC122829.1-201ENSMUST00000219743 1631 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Pnliprp1-201ENSMUST00000048644 1619 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Atxn7l1-201ENSMUST00000077456 1624 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm44417-201ENSMUST00000203298 3359 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm29028-201ENSMUST00000186297 2166 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm16508-201ENSMUST00000197066 2742 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm7682-202ENSMUST00000202916 1582 ntAPPRIS P5 TSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm38416-201ENSMUST00000209648 3565 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Ighv14-2-201ENSMUST00000103467 351 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Trav9-2-201ENSMUST00000103654 563 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Rpl23a-ps3-201ENSMUST00000104925 468 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 0610037L13Rik-204ENSMUST00000106727 926 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Dpm1-202ENSMUST00000109193 1076 ntTSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm12038-201ENSMUST00000117322 207 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm6136-201ENSMUST00000120149 891 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 9430024E24Rik-201ENSMUST00000130532 713 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm14170-201ENSMUST00000133751 331 ntTSL 3 BASIC6.33□□□□□ -1.4
Hmgb3O54879 AC034099.1-202ENSMUST00000133843 833 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 1700092C02Rik-201ENSMUST00000134397 359 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Myl2-201ENSMUST00000014080 662 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Apoc2-203ENSMUST00000142352 727 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Acss2os-201ENSMUST00000148685 629 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm25604-201ENSMUST00000158359 133 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm20492-201ENSMUST00000172591 286 ntTSL 3 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Pon1-203ENSMUST00000176945 619 ntTSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Tnfaip8-213ENSMUST00000180305 369 ntTSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 1700100L14Rik-202ENSMUST00000189028 762 ntTSL 2 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm38051-201ENSMUST00000193740 433 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 4930535E02Rik-201ENSMUST00000194463 655 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm36996-201ENSMUST00000194466 250 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm5981-201ENSMUST00000199912 487 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm44649-202ENSMUST00000206896 635 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Nudc-ps1-201ENSMUST00000209275 551 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gm18030-201ENSMUST00000222163 731 ntBASIC6.33□□□□□ -1.4
Hmgb3O54879 Tmem30c-201ENSMUST00000023434 2973 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
Hmgb3O54879 Gzmk-201ENSMUST00000038212 1028 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Hmgb3O54879 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms