Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 Gm12844-201ENSMUST00000119463 582 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm8832-201ENSMUST00000119890 395 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Crem-229ENSMUST00000151084 957 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm12746-201ENSMUST00000151369 615 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm26357-201ENSMUST00000158218 115 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Cd180-202ENSMUST00000167144 430 ntTSL 2 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm17157-201ENSMUST00000172397 348 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm3002-202ENSMUST00000178256 444 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm2974-202ENSMUST00000180184 447 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm9381-201ENSMUST00000182285 1012 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm29291-201ENSMUST00000186055 686 ntTSL 3 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Nanog-ps1-201ENSMUST00000188967 250 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm37904-201ENSMUST00000195591 312 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm43471-201ENSMUST00000197550 467 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm23786-202ENSMUST00000200181 119 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 AC108846.3-201ENSMUST00000214078 247 ntTSL 5 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 1700030E10Rik-201ENSMUST00000218164 721 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 AC105950.2-201ENSMUST00000220938 368 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 4930473H19Rik-202ENSMUST00000222124 1000 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 AC113178.1-201ENSMUST00000227616 935 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 n-R5s74-201ENSMUST00000082654 116 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm24696-201ENSMUST00000083878 134 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Rab25-201ENSMUST00000008745 1081 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Olfr1361-202ENSMUST00000214321 2792 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Dcx-203ENSMUST00000112851 4095 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Txndc16-204ENSMUST00000128484 2069 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Zbtb18-206ENSMUST00000193480 3734 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 A330058E17Rik-201ENSMUST00000200757 3890 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 A630001G21Rik-201ENSMUST00000064788 1353 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Ftx-203ENSMUST00000130063 4275 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Tmem173-201ENSMUST00000115728 2302 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Cyp19a1-203ENSMUST00000215736 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Abraxas1-203ENSMUST00000117364 1657 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Gm37274-201ENSMUST00000192167 1682 ntBASIC6.3□□□□□ -1.4
Nup35Q8R4R6 Vtcn1-201ENSMUST00000054791 2622 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm42514-201ENSMUST00000196636 1832 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Apbb1ip-201ENSMUST00000014290 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Fcgr3-201ENSMUST00000164044 1347 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Abi1-212ENSMUST00000153931 2729 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Osbpl9-201ENSMUST00000030288 2871 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm35835-201ENSMUST00000214447 4589 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Ube3c-204ENSMUST00000199032 3171 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Kcnj15-205ENSMUST00000113858 5309 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Myo6-205ENSMUST00000127779 4067 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Rapgef5-205ENSMUST00000222105 2677 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Rc3h1-202ENSMUST00000161609 11006 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Olfr62-201ENSMUST00000102666 949 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Trav15-2-dv6-2-201ENSMUST00000103660 370 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Rpsa-ps3-201ENSMUST00000117789 876 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm14682-201ENSMUST00000117977 524 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Sycn-201ENSMUST00000119180 556 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm14528-201ENSMUST00000120615 231 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm11953-201ENSMUST00000122352 1003 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Kbtbd8os-201ENSMUST00000135145 427 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Plgrkt-208ENSMUST00000143467 1020 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm23555-201ENSMUST00000157815 135 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm22202-201ENSMUST00000158608 311 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Nup37-202ENSMUST00000169309 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm24824-201ENSMUST00000175097 78 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Rnf141-210ENSMUST00000177462 859 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm37822-201ENSMUST00000192618 1109 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm42525-201ENSMUST00000196257 527 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm30835-201ENSMUST00000198825 689 ntTSL 3 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm45408-201ENSMUST00000211080 390 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Chmp2a-204ENSMUST00000211344 606 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Chmp2a-206ENSMUST00000211626 726 ntTSL 2 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 4930442G15Rik-201ENSMUST00000213112 1000 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Olfr371-202ENSMUST00000218663 1162 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 E130119H09Rik-201ENSMUST00000223176 978 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 AC125223.1-201ENSMUST00000224004 749 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 2410137M14Rik-201ENSMUST00000039846 865 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Olfr417-201ENSMUST00000085862 930 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Ccdc191-206ENSMUST00000178400 3643 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Zfp963-201ENSMUST00000130458 2291 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Mcf2l-205ENSMUST00000110871 3401 ntTSL 5 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm32647-202ENSMUST00000206579 3147 ntTSL 3 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm44014-201ENSMUST00000205150 1509 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Gm46995-201ENSMUST00000223445 1378 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 AC159195.2-201ENSMUST00000223670 3757 ntBASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Vmn1r197-202ENSMUST00000226225 5326 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Zfp85os-201ENSMUST00000049518 2624 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Nup35Q8R4R6 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Nup35Q8R4R6 Nsun7-201ENSMUST00000031109 2345 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms