Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Gm36380-201ENSMUST00000210339 4379 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Slc5a6-206ENSMUST00000202556 3078 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Wac-202ENSMUST00000092112 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Vmn2r30-201ENSMUST00000072475 3616 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm43670-201ENSMUST00000199047 1767 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Tmem144-201ENSMUST00000029568 2898 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Rps20-203ENSMUST00000138502 3706 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm23358-201ENSMUST00000103887 110 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm12604-201ENSMUST00000118382 380 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm11997-201ENSMUST00000118697 313 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm11443-201ENSMUST00000118790 479 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm9378-201ENSMUST00000120315 471 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm14414-201ENSMUST00000120833 573 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm12692-201ENSMUST00000121092 546 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm16618-201ENSMUST00000134992 955 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm25455-201ENSMUST00000157946 325 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm22949-201ENSMUST00000158562 105 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Olfr457-201ENSMUST00000170504 1039 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm8893-201ENSMUST00000172146 1242 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Obox2-203ENSMUST00000174076 782 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm5973-201ENSMUST00000178542 496 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Mir6912-201ENSMUST00000184456 70 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm6236-201ENSMUST00000193785 1009 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm36667-201ENSMUST00000196125 753 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm43287-201ENSMUST00000197747 600 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 AC124585.1-201ENSMUST00000213334 953 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 AC153845.1-201ENSMUST00000213596 428 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 AC116487.1-201ENSMUST00000227033 339 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Glycam1-201ENSMUST00000023134 628 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Arhgef38-201ENSMUST00000054105 814 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Defb34-201ENSMUST00000064475 246 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Olfr1315-ps1-203ENSMUST00000217078 1559 ntAPPRIS P5 TSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Gm28892-201ENSMUST00000188123 2721 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Aloxe3-201ENSMUST00000021268 3019 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Krt39-202ENSMUST00000107445 1633 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Prdm11-202ENSMUST00000111274 11678 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Tespa1-201ENSMUST00000042586 1663 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Fancd2os-201ENSMUST00000035870 1358 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 CU024890.1-201ENSMUST00000221361 2019 ntBASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Mapre2-209ENSMUST00000170802 3936 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
Trim29Q8R2Q0 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Lilra5-201ENSMUST00000117550 2109 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Olfr517-202ENSMUST00000216500 2139 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Nat2-202ENSMUST00000163856 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Gm31408-201ENSMUST00000216695 1455 ntTSL 5 BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Olfr76-202ENSMUST00000213471 3109 ntTSL 5 BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 1700027J07Rik-203ENSMUST00000217501 1884 ntTSL 5 BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Mbd5-201ENSMUST00000047413 8543 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Ttc38-203ENSMUST00000146088 3749 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Mx1-201ENSMUST00000023655 3385 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
Trim29Q8R2Q0 Naip1-202ENSMUST00000221727 1968 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Dnmbp-203ENSMUST00000212048 4186 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm12445-201ENSMUST00000117947 885 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Myl1-202ENSMUST00000119429 803 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm13224-201ENSMUST00000119586 94 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Defa-ps3-201ENSMUST00000142705 282 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm13538-201ENSMUST00000143166 548 ntTSL 3 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Scarna17-201ENSMUST00000158064 79 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm7678-201ENSMUST00000181879 943 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm28208-201ENSMUST00000185941 1157 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm28100-201ENSMUST00000186560 582 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm29672-201ENSMUST00000187118 1038 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm28980-201ENSMUST00000187877 219 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm28853-202ENSMUST00000188084 1157 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm28864-201ENSMUST00000189251 644 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm28430-201ENSMUST00000191031 628 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm28133-202ENSMUST00000191344 1158 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 C630050I24Rik-201ENSMUST00000193420 783 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 4933439J24Rik-201ENSMUST00000200866 853 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm34701-201ENSMUST00000204213 849 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Ceacam-ps1-201ENSMUST00000205380 794 ntTSL 2 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Mrpl22-201ENSMUST00000020820 722 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm44546-201ENSMUST00000208353 368 ntTSL 2 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm40646-202ENSMUST00000218796 793 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm32089-201ENSMUST00000221222 1193 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm7086-202ENSMUST00000228849 506 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 6030452D12Rik-201ENSMUST00000066875 669 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm6578-201ENSMUST00000080891 984 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm9929-201ENSMUST00000171747 1671 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Zfp809-205ENSMUST00000215618 1313 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Igsf1-203ENSMUST00000114891 1761 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm38014-201ENSMUST00000193349 2612 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Gm6819-201ENSMUST00000185325 1891 ntBASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 6430562O15Rik-202ENSMUST00000180808 3997 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim29Q8R2Q0 Bmpr1a-202ENSMUST00000165280 1945 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim29Q8R2Q0 4933402E13Rik-201ENSMUST00000051414 1970 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim29Q8R2Q0 Zp4-ps-201ENSMUST00000220980 1561 ntBASIC8.95□□□□□ -0.98
Trim29Q8R2Q0 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim29Q8R2Q0 Gm42996-201ENSMUST00000196116 1636 ntBASIC8.95□□□□□ -0.98
Trim29Q8R2Q0 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim29Q8R2Q0 Xlr5b-202ENSMUST00000114518 1652 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim29Q8R2Q0 Xlr5a-204ENSMUST00000179600 1650 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms