Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm21173-201ENSMUST00000189238 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm20870-201ENSMUST00000189315 922 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm20903-201ENSMUST00000189346 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm21209-202ENSMUST00000189354 922 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm20937-203ENSMUST00000189422 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm21497-201ENSMUST00000189455 919 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm20890-201ENSMUST00000189518 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm21477-202ENSMUST00000189543 924 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm29110-201ENSMUST00000189924 922 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm20814-201ENSMUST00000190173 922 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm29573-201ENSMUST00000190291 919 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Sly-202ENSMUST00000190292 922 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm21650-202ENSMUST00000190551 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm28961-201ENSMUST00000190573 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm20905-201ENSMUST00000190782 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm20817-201ENSMUST00000191123 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm29372-201ENSMUST00000191416 364 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm21258-202ENSMUST00000191553 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm29866-201ENSMUST00000191675 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm31571-201ENSMUST00000192521 922 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm21366-201ENSMUST00000192892 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm43476-201ENSMUST00000197873 405 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm8834-201ENSMUST00000216459 565 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm19007-201ENSMUST00000217746 874 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 AC025913.1-202ENSMUST00000220385 824 ntTSL 5 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm5374-202ENSMUST00000222910 314 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 CT571256.1-201ENSMUST00000226045 585 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gstp3-201ENSMUST00000076451 685 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm4822-201ENSMUST00000077551 479 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Olfr1338-201ENSMUST00000084315 942 ntAPPRIS P2 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Olfr606-201ENSMUST00000098200 960 ntAPPRIS P1 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Mpp1-203ENSMUST00000114092 1378 ntTSL 5 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 4921534H16Rik-201ENSMUST00000162370 1392 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Zmynd8-201ENSMUST00000018050 4130 ntAPPRIS ALT2 TSL 5 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Nqo1-201ENSMUST00000003947 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Fam227b-201ENSMUST00000110446 1858 ntAPPRIS P2 TSL 5 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm44167-201ENSMUST00000204957 1878 ntBASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm28758-201ENSMUST00000186123 2167 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gfpt1-201ENSMUST00000032057 2286 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Lrrc49-203ENSMUST00000114032 2586 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Grik1-202ENSMUST00000072256 3655 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm40841-202ENSMUST00000222823 3989 ntTSL 5 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Kcnj15-201ENSMUST00000037154 5089 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Frk-202ENSMUST00000170771 3406 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Cwc25-201ENSMUST00000018685 3105 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Lrp1b-207ENSMUST00000142688 2911 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Wdr76-202ENSMUST00000099473 2315 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Rbms3-207ENSMUST00000164018 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 D430036J16Rik-202ENSMUST00000181447 1732 ntTSL 1 (best) BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Prim1-205ENSMUST00000178041 1536 ntAPPRIS ALT1 TSL 5 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Gm3286-201ENSMUST00000171752 1316 ntAPPRIS P3 TSL 5 BASIC8.8□□□□□ -1
Pcdhb7Q8CDY9 Rasgef1c-201ENSMUST00000063444 3378 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Clasp1-218ENSMUST00000190571 7910 ntAPPRIS P5 TSL 5 BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Stard13-202ENSMUST00000110483 5662 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Frrs1-201ENSMUST00000040260 2377 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Grk3-201ENSMUST00000065167 6533 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Rfxank-201ENSMUST00000075724 3609 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Zmiz2-203ENSMUST00000109785 3542 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm15189-201ENSMUST00000121164 1966 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Tsnaxip1-203ENSMUST00000212566 1993 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Enox2-205ENSMUST00000114918 3226 ntTSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Zfp946-202ENSMUST00000120222 2926 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Ddr2-201ENSMUST00000027985 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm43465-201ENSMUST00000200367 2802 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Ccdc77-201ENSMUST00000032283 2610 ntAPPRIS P2 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm12263-201ENSMUST00000119105 1482 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm26597-201ENSMUST00000181648 1477 ntTSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm37398-201ENSMUST00000191914 1466 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm44753-201ENSMUST00000207739 2335 ntTSL 5 BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Pde1c-205ENSMUST00000166102 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Kirrel3-206ENSMUST00000187625 4108 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Nedd4l-204ENSMUST00000224347 3150 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Plag1-201ENSMUST00000003369 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 n-R5s2-201ENSMUST00000101968 119 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm24794-201ENSMUST00000104288 140 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 n-R5s194-201ENSMUST00000104719 119 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Cuta-202ENSMUST00000114935 597 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm12393-201ENSMUST00000117084 848 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm12392-201ENSMUST00000118014 938 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm13863-201ENSMUST00000118782 602 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 AV064505-201ENSMUST00000124572 522 ntTSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Ctcflos-202ENSMUST00000142207 918 ntTSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Naa38-204ENSMUST00000144531 671 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm11314-201ENSMUST00000148492 541 ntTSL 5 BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm23229-201ENSMUST00000157297 105 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm25839-201ENSMUST00000158921 103 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Gm15664-201ENSMUST00000160167 184 ntBASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Arpp21-221ENSMUST00000162065 2996 ntTSL 1 (best) BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Vmn1r101-201ENSMUST00000164245 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Vmn1r119-201ENSMUST00000164683 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Pcdhb7Q8CDY9 Vmn1r149-201ENSMUST00000165916 924 ntAPPRIS P1 BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms