Protein–RNA interactions for Protein: Q8C8B0

Alx1, ALX homeobox protein 1, mousemouse

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx1Q8C8B0 Prox2-202ENSMUST00000177289 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Alx1Q8C8B0 Pard3bos1-202ENSMUST00000138535 1878 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Alx1Q8C8B0 Plscr2-201ENSMUST00000034932 1874 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Alx1Q8C8B0 Csnk1g1-204ENSMUST00000130798 1648 ntTSL 5 BASIC9.13□□□□□ -0.95
Alx1Q8C8B0 1700012E03Rik-201ENSMUST00000186237 1377 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Rgs8-203ENSMUST00000111812 3625 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm43621-201ENSMUST00000202733 2022 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 9030624J02Rik-201ENSMUST00000033280 2934 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Ctnnd1-219ENSMUST00000111693 6255 ntAPPRIS ALT1 TSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Wls-201ENSMUST00000068952 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Dgkh-206ENSMUST00000228362 3308 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Pappa2-202ENSMUST00000159861 9518 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Cd300lb-201ENSMUST00000106581 2880 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 AC158799.1-204ENSMUST00000217441 1321 ntTSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Smarcal1-201ENSMUST00000047615 3059 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm45634-201ENSMUST00000209736 1990 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Zfp942-202ENSMUST00000091879 3265 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm11934-201ENSMUST00000132553 1536 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Olfr1394-202ENSMUST00000216273 3024 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 5430403N17Rik-201ENSMUST00000210717 2553 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm25167-201ENSMUST00000104188 120 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Paqr5-202ENSMUST00000113990 1073 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm11558-201ENSMUST00000118454 459 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm14053-201ENSMUST00000121662 470 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm15417-201ENSMUST00000126926 925 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 1810062O18Rik-204ENSMUST00000141265 751 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm22687-201ENSMUST00000158301 105 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm22408-201ENSMUST00000174925 65 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Mir3072-201ENSMUST00000175610 83 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Trav7n-6-201ENSMUST00000178100 381 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Txn-ps1-201ENSMUST00000186385 309 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 1700027F09Rik-201ENSMUST00000189767 767 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm29562-201ENSMUST00000190113 904 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm26672-203ENSMUST00000192501 756 ntTSL 3 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm43542-201ENSMUST00000199505 379 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm42965-201ENSMUST00000201254 250 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm7392-201ENSMUST00000217815 345 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm8616-201ENSMUST00000222175 1037 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 AC130673.1-201ENSMUST00000227992 435 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Rps6-ps1-201ENSMUST00000074205 750 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Ctnnd1-203ENSMUST00000067232 6119 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 B230118H07Rik-203ENSMUST00000111231 2273 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Abcc12-201ENSMUST00000080115 4511 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 AC166341.5-201ENSMUST00000222206 1400 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Olfr43-202ENSMUST00000205664 2018 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm7134-201ENSMUST00000122296 2406 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Gm20388-201ENSMUST00000127664 3953 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 AC165260.6-202ENSMUST00000224959 1958 ntBASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Inpp5d-211ENSMUST00000170300 3942 ntTSL 2 BASIC9.12□□□□□ -0.95
Alx1Q8C8B0 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Zfp946-201ENSMUST00000088763 2935 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Ptprr-202ENSMUST00000105271 2856 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Itpr1-201ENSMUST00000032192 9870 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm24462-201ENSMUST00000102430 106 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Igkv12-46-201ENSMUST00000103365 377 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Lipo4-201ENSMUST00000112511 1188 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm7803-201ENSMUST00000117176 1015 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm14509-201ENSMUST00000117312 1286 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm12959-201ENSMUST00000119396 403 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm14824-201ENSMUST00000119421 737 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm12297-201ENSMUST00000121380 979 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm12634-201ENSMUST00000122157 992 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm25780-201ENSMUST00000122528 253 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm15668-201ENSMUST00000140506 678 ntTSL 3 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm16015-201ENSMUST00000154897 390 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm28888-201ENSMUST00000186556 316 ntTSL 3 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm5920-201ENSMUST00000187390 853 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm7200-201ENSMUST00000188426 1163 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm38203-201ENSMUST00000191815 245 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm37336-201ENSMUST00000192794 760 ntTSL 2 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 4930584F24Rik-204ENSMUST00000198070 1163 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 D130017N08Rik-204ENSMUST00000199836 506 ntTSL 2 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm7542-201ENSMUST00000201140 777 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm45216-201ENSMUST00000205547 600 ntTSL 3 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm29918-202ENSMUST00000206036 258 ntTSL 5 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm7151-201ENSMUST00000211511 954 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 4930584E12Rik-201ENSMUST00000216646 981 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm33778-201ENSMUST00000216884 704 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 AC139323.1-201ENSMUST00000223370 1040 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 CT009556.3-201ENSMUST00000226173 513 ntBASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Olfr1377-201ENSMUST00000075177 1063 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Olfr665-201ENSMUST00000098165 951 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Mctp2-201ENSMUST00000079323 5802 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Cd38-201ENSMUST00000030964 3270 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Virma-201ENSMUST00000055372 3954 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Alx1Q8C8B0 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms